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The Amino Acids of mtCO1 (5904-7445)

 
           5912        5921        5930        5939        5948        5957
5'  ATG TTC GCC GAC CGT TGA CTA TTC TCT ACA AAC CAC AAA GAC ATT GGA ACA CTA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     M   F   A   D   R   W   L   F   S   T   N   H   K   D   I   G   T   L

           5966        5975        5984        5993        6002        6011
    TAC CTA TTA TTC GGC GCA TGA GCT GGA GTC CTA GGC ACA GCT CTA AGC CTC CTT
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     Y   L   L   F   G   A   W   A   G   V   L   G   T   A   L   S   L   L

           6020        6029        6038        6047        6056        6065
    ATT CGA GCC GAG CTG GGC CAG CCA GGC AAC CTT CTA GGT AAC GAC CAC ATC TAC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     I   R   A   E   L   G   Q   P   G   N   L   L   G   N   D   H   I   Y

           6074        6083        6092        6101        6110        6119
    AAC GTT ATC GTC ACA GCC CAT GCA TTT GTA ATA ATC TTC TTC ATA GTA ATA CCC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     N   V   I   V   T   A   H   A   F   V   M   I   F   F   M   V   M   P

           6128        6137        6146        6155        6164        6173
    ATC ATA ATC GGA GGC TTT GGC AAC TGA CTA GTT CCC CTA ATA ATC GGT GCC CCC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     I   M   I   G   G   F   G   N   W   L   V   P   L   M   I   G   A   P

           6182        6191        6200        6209        6218        6227
    GAT ATG GCG TTT CCC CGC ATA AAC AAC ATA AGC TTC TGA CTC TTA CCT CCC TCT
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     D   M   A   F   P   R   M   N   N   M   S   F   W   L   L   P   P   S

           6236        6245        6254        6263        6272        6281
    CTC CTA CTC CTG CTC GCA TCT GCT ATA GTG GAG GCC GGA GCA GGA ACA GGT TGA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     L   L   L   L   L   A   S   A   M   V   E   A   G   A   G   T   G   W

           6290        6299        6308        6317        6326        6335
    ACA GTC TAC CCT CCC TTA GCA GGG AAC TAC TCC CAC CCT GGA GCC TCC GTA GAC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     T   V   Y   P   P   L   A   G   N   Y   S   H   P   G   A   S   V   D

           6344        6353        6362        6371        6380        6389
    CTA ACC ATC TTC TCC TTA CAC CTA GCA GGT GTC TCC TCT ATC TTA GGG GCC ATC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     L   T   I   F   S   L   H   L   A   G   V   S   S   I   L   G   A   I

           6398        6407        6416        6425        6434        6443
    AAT TTC ATC ACA ACA ATT ATC AAT ATA AAA CCC CCT GCC ATA ACC CAA TAC CAA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     N   F   I   T   T   I   I   N   M   K   P   P   A   M   T   Q   Y   Q

           6452        6461        6470        6479        6488        6497
    ACG CCC CTC TTC GTC TGA TCC GTC CTA ATC ACA GCA GTC CTA CTT CTC CTA TCT
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     T   P   L   F   V   W   S   V   L   I   T   A   V   L   L   L   L   S

           6506        6515        6524        6533        6542        6551
    CTC CCA GTC CTA GCT GCT GGC ATC ACT ATA CTA CTA ACA GAC CGC AAC CTC AAC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     L   P   V   L   A   A   G   I   T   M   L   L   T   D   R   N   L   N

           6560        6569        6578        6587        6596        6605
    ACC ACC TTC TTC GAC CCC GCC GGA GGA GGA GAC CCC ATT CTA TAC CAA CAC CTA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     T   T   F   F   D   P   A   G   G   G   D   P   I   L   Y   Q   H   L

           6614        6623        6632        6641        6650        6659
    TTC TGA TTT TTC GGT CAC CCT GAA GTT TAT ATT CTT ATC CTA CCA GGC TTC GGA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     F   W   F   F   G   H   P   E   V   Y   I   L   I   L   P   G   F   G

           6668        6677        6686        6695        6704        6713
    ATA ATC TCC CAT ATT GTA ACT TAC TAC TCC GGA AAA AAA GAA CCA TTT GGA TAC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     M   I   S   H   I   V   T   Y   Y   S   G   K   K   E   P   F   G   Y

           6722        6731        6740        6749        6758        6767
    ATA GGT ATG GTC TGA GCT ATG ATA TCA ATT GGC TTC CTA GGG TTT ATC GTG TGA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     M   G   M   V   W   A   M   M   S   I   G   F   L   G   F   I   V   W

           6776        6785        6794        6803        6812        6821
    GCA CAC CAT ATA TTT ACA GTA GGA ATA GAC GTA GAC ACA CGA GCA TAT TTC ACC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     A   H   H   M   F   T   V   G   M   D   V   D   T   R   A   Y   F   T

           6830        6839        6848        6857        6866        6875
    TCC GCT ACC ATA ATC ATC GCT ATC CCC ACC GGC GTC AAA GTA TTT AGC TGA CTC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     S   A   T   M   I   I   A   I   P   T   G   V   K   V   F   S   W   L

           6884        6893        6902        6911        6920        6929
    GCC ACA CTC CAC GGA AGC AAT ATG AAA TGA TCT GCT GCA GTG CTC TGA GCC CTA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     A   T   L   H   G   S   N   M   K   W   S   A   A   V   L   W   A   L

           6938        6947        6956        6965        6974        6983
    GGA TTC ATC TTT CTT TTC ACC GTA GGT GGC CTG ACT GGC ATT GTA TTA GCA AAC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     G   F   I   F   L   F   T   V   G   G   L   T   G   I   V   L   A   N

           6992        7001        7010        7019        7028        7037
    TCA TCA CTA GAC ATC GTA CTA CAC GAC ACG TAC TAC GTT GTA GCC CAC TTC CAC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     S   S   L   D   I   V   L   H   D   T   Y   Y   V   V   A   H   F   H

           7046        7055        7064        7073        7082        7091
    TAT GTC CTA TCA ATA GGA GCT GTA TTT GCC ATC ATA GGA GGC TTC ATT CAC TGA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     Y   V   L   S   M   G   A   V   F   A   I   M   G   G   F   I   H   W

           7100        7109        7118        7127        7136        7145
    TTT CCC CTA TTC TCA GGC TAC ACC CTA GAC CAA ACC TAC GCC AAA ATC CAT TTC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     F   P   L   F   S   G   Y   T   L   D   Q   T   Y   A   K   I   H   F

           7154        7163        7172        7181        7190        7199
    ACT ATC ATA TTC ATC GGC GTA AAT CTA ACT TTC TTC CCA CAA CAC TTT CTC GGC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     T   I   M   F   I   G   V   N   L   T   F   F   P   Q   H   F   L   G

           7208        7217        7226        7235        7244        7253
    CTA TCC GGA ATG CCC CGA CGT TAC TCG GAC TAC CCC GAT GCA TAC ACC ACA TGA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     L   S   G   M   P   R   R   Y   S   D   Y   P   D   A   Y   T   T   W

           7262        7271        7280        7289        7298        7307
    AAC ATC CTA TCA TCT GTA GGC TCA TTC ATT TCT CTA ACA GCA GTA ATA TTA ATA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     N   I   L   S   S   V   G   S   F   I   S   L   T   A   V   M   L   M

           7316        7325        7334        7343        7352        7361
    ATT TTC ATG ATT TGA GAA GCC TTC GCT TCG AAG CGA AAA GTC CTA ATA GTA GAA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     I   F   M   I   W   E   A   F   A   S   K   R   K   V   L   M   V   E

           7370        7379        7388        7397        7406        7415
    GAA CCC TCC ATA AAC CTG GAG TGA CTA TAT GGA TGC CCC CCA CCC TAC CAC ACA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     E   P   S   M   N   L   E   W   L   Y   G   C   P   P   P   Y   H   T

           7424        7433        7442
    TTC GAA GAA CCC GTA TAC ATA AAA TCT AGA 3'
    --- --- --- --- --- --- --- --- --- ---
     F   E   E   P   V   Y   M   K   S   *


* Terminates at UAG with frameshift (Temperley 2010)

Amino Acid Distribution in human mtCO1

CO1 (5904-7445) AA

#

%

Ala (A)

40

7.8%

Arg (R)

8

1.6%

Asn (N)

17

3.3%

Asp (D)

15

2.9%

Cys (C)

1

0.2%

Gln (Q)

6

1.2%

Glu (E)

10

1.9%

Gly (G)

46

8.9%

His (H)

18

3.5%

Ile (I)

38

7.4%

End (*)

1

0.2%

Leu1 (L)(UUA/G)

7

1.4%

Leu2 (L)(CUN)

55

10.7%

Lys (K)

10

1.9%

Met (M)

32

6.2%

Phe (F)

41

8.0%

Pro (p)

29

5.6%

Ser1 (S)(UCN)

28

5.4%

Ser2 (S)(AGU/C)

4

0.8%

Thr (T)

34

6.6%

Trp (W)

16

3.1%

Tyr (Y)

22

4.3%

Val (V)

36

7.0%

CO1 Total AA

514

100.0%

Acidic (Asp + Glu)

25

4.9%

Basic (Arg + Lys)

18

3.5%

Aromatic (Phe + Trp + Tyr)

79

15.4%

Hydrophobic (Aromatic + Ile + Leu + Met + Val)

247

48.1%

Molecular Wt

57050

Average pI

6.04



Amino acid detail: ATP6, ATP8, ND1, ND2, ND3, ND4, ND4L, ND5, ND6, CO1, CO2, CO3, CytB.

Go to the Human Mitochondrial Genetic Code.
Topic revision: r1 - 15 Sep 2015, UnknownUser
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