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The Amino Acids of mtND1 (3307-4262)

           3315        3324        3333        3342        3351        3360
5'  ATA CCC ATG GCC AAC CTC CTA CTC CTC ATT GTA CCC ATT CTA ATC GCA ATG GCA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     M   P   M   A   N   L   L   L   L   I   V   P   I   L   I   A   M   A

           3369        3378        3387        3396        3405        3414
    TTC CTA ATG CTT ACC GAA CGA AAA ATT CTA GGC TAT ATA CAA CTA CGC AAA GGC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     F   L   M   L   T   E   R   K   I   L   G   Y   M   Q   L   R   K   G

           3423        3432        3441        3450        3459        3468
    CCC AAC GTT GTA GGC CCC TAC GGG CTA CTA CAA CCC TTC GCT GAC GCC ATA AAA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     P   N   V   V   G   P   Y   G   L   L   Q   P   F   A   D   A   M   K

           3477        3486        3495        3504        3513        3522
    CTC TTC ACC AAA GAG CCC CTA AAA CCC GCC ACA TCT ACC ATC ACC CTC TAC ATC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     L   F   T   K   E   P   L   K   P   A   T   S   T   I   T   L   Y   I

           3531        3540        3549        3558        3567        3576
    ACC GCC CCG ACC TTA GCT CTC ACC ATC GCT CTT CTA CTA TGA ACC CCC CTC CCC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     T   A   P   T   L   A   L   T   I   A   L   L   L   W   T   P   L   P

           3585        3594        3603        3612        3621        3630
    ATA CCC AAC CCC CTG GTC AAC CTC AAC CTA GGC CTC CTA TTT ATT CTA GCC ACC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     M   P   N   P   L   V   N   L   N   L   G   L   L   F   I   L   A   T

           3639        3648        3657        3666        3675        3684
    TCT AGC CTA GCC GTT TAC TCA ATC CTC TGA TCA GGG TGA GCA TCA AAC TCA AAC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     S   S   L   A   V   Y   S   I   L   W   S   G   W   A   S   N   S   N

           3693        3702        3711        3720        3729        3738
    TAC GCC CTG ATC GGC GCA CTG CGA GCA GTA GCC CAA ACA ATC TCA TAT GAA GTC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     Y   A   L   I   G   A   L   R   A   V   A   Q   T   I   S   Y   E   V

           3747        3756        3765        3774        3783        3792
    ACC CTA GCC ATC ATT CTA CTA TCA ACA TTA CTA ATA AGT GGC TCC TTT AAC CTC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     T   L   A   I   I   L   L   S   T   L   L   M   S   G   S   F   N   L

           3801        3810        3819        3828        3837        3846
    TCC ACC CTT ATC ACA ACA CAA GAA CAC CTC TGA TTA CTC CTG CCA TCA TGA CCC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     S   T   L   I   T   T   Q   E   H   L   W   L   L   L   P   S   W   P

           3855        3864        3873        3882        3891        3900
    TTG GCC ATA ATA TGA TTT ATC TCC ACA CTA GCA GAG ACC AAC CGA ACC CCC TTC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     L   A   M   M   W   F   I   S   T   L   A   E   T   N   R   T   P   F

           3909        3918        3927        3936        3945        3954
    GAC CTT GCC GAA GGG GAG TCC GAA CTA GTC TCA GGC TTC AAC ATC GAA TAC GCC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     D   L   A   E   G   E   S   E   L   V   S   G   F   N   I   E   Y   A

           3963        3972        3981        3990        3999        4008
    GCA GGC CCC TTC GCC CTA TTC TTC ATA GCC GAA TAC ACA AAC ATT ATT ATA ATA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     A   G   P   F   A   L   F   F   M   A   E   Y   T   N   I   I   M   M

           4017        4026        4035        4044        4053        4062
    AAC ACC CTC ACC ACT ACA ATC TTC CTA GGA ACA ACA TAT GAC GCA CTC TCC CCT
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     N   T   L   T   T   T   I   F   L   G   T   T   Y   D   A   L   S   P

           4071        4080        4089        4098        4107        4116
    GAA CTC TAC ACA ACA TAT TTT GTC ACC AAG ACC CTA CTT CTA ACC TCC CTG TTC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     E   L   Y   T   T   Y   F   V   T   K   T   L   L   L   T   S   L   F

           4125        4134        4143        4152        4161        4170
    TTA TGA ATT CGA ACA GCA TAC CCC CGA TTC CGC TAC GAC CAA CTC ATA CAC CTC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     L   W   I   R   T   A   Y   P   R   F   R   Y   D   Q   L   M   H   L

           4179        4188        4197        4206        4215        4224
    CTA TGA AAA AAC TTC CTA CCA CTC ACC CTA GCA TTA CTT ATA TGA TAT GTC TCC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     L   W   K   N   F   L   P   L   T   L   A   L   L   M   W   Y   V   S

           4233        4242        4251        4260
    ATA CCC ATT ACA ATC TCC AGC ATT CCC CCT CAA ACC TA 3'
    --- --- --- --- --- --- --- --- --- --- --- --- --
     M   P   I   T   I   S   S   I   P   P   Q   T



Nucleotide 3423T represents a corrected Cambridge sequence error per Andrews etal (1999).

Amino Acid Distribution in human mtND1

ND1 (3307-4262) AA

#

%

Ala (A)

27

8.5%

Arg (R)

7

2.2%

Asn (N)

13

4.1%

Asp (D)

4

1.3%

Cys (C)

0

0.0%

Gln (Q)

6

1.9%

Glu (E)

11

3.5%

Gly (G)

12

3.8%

His (H)

2

0.6%

Ile (I)

23

7.2%

End (*)

0

0.0%

Leu1 (L)(UUA/G)

6

1.9%

Leu2 (L)(CUN)

57

17.9%

Lys (K)

7

2.2%

Met (M)

16

5.0%

phe (F)

16

5.0%

pro (p)

22

6.9%

Ser1 (S)(UCN)

18

5.7%

Ser2 (S)(AGU/C)

3

0.9%

Thr (T)

35

11.0%

Trp (W)

9

2.8%

Tyr (Y)

14

4.4%

Val (V)

10

3.1%

ND1 Total AA

318

100.0%

Acidic (Asp + Glu)

15

4.7%

basic (Arg + Lys)

14

4.4%

Aromatic (phe + Trp + Tyr)

39

12.3%

Hydrophobic (Aromatic + Ile + Leu + Met + Val)

151

47.5%

Molecular Wt

35666

Average pI

6.06



Amino acid detail: ATP6, ATP8, ND1, ND2, ND3, ND4, ND4L, ND5, ND6, CO1, CO2, CO3, CytB.

Go to the Human Mitochondrial Genetic Code.
Topic revision: r1 - 15 Sep 2015, UnknownUser
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