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The Amino Acids of mtND2 (4470-5511)


           4478        4487        4496        4505        4514        4523
5'  ATT AAT CCC CTG GCC CAA CCC GTC ATC TAC TCT ACC ATC TTT GCA GGC ACA CTC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
    I/M  N   P   L   A   Q   P   V   I   Y   S   T   I   F   A   G   T   L

           4532        4541        4550        4559        4568        4577
    ATC ACA GCG CTA AGC TCG CAC TGA TTT TTT ACC TGA GTA GGC CTA GAA ATA AAC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     I   T   A   L   S   S   H   W   F   F   T   W   V   G   L   E   M   N

           4586        4595        4604        4613        4622        4631
    ATG CTA GCT TTT ATT CCA GTT CTA ACC AAA AAA ATA AAC CCT CGT TCC ACA GAA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     M   L   A   F   I   P   V   L   T   K   K   M   N   P   R   S   T   E

           4640        4649        4658        4667        4676        4685
    GCT GCC ATC AAG TAT TTC CTC ACG CAA GCA ACC GCA TCC ATA ATC CTT CTA ATA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     A   A   I   K   Y   F   L   T   Q   A   T   A   S   M   I   L   L   M

           4694        4703        4712        4721        4730        4739
    GCT ATC CTC TTC AAC AAT ATA CTC TCC GGA CAA TGA ACC ATA ACC AAT ACT ACC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     A   I   L   F   N   N   M   L   S   G   Q   W   T   M   T   N   T   T

           4748        4757        4766        4775        4784        4793
    AAT CAA TAC TCA TCA TTA ATA ATC ATA ATA GCT ATA GCA ATA AAA CTA GGA ATA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     N   Q   Y   S   S   L   M   I   M   M   A   M   A   M   K   L   G   M

           4802        4811        4820        4829        4838        4847
    GCC CCC TTT CAC TTC TGA GTC CCA GAG GTT ACC CAA GGC ACC CCT CTG ACA TCC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     A   P   F   H   F   W   V   P   E   V   T   Q   G   T   P   L   T   S

           4856        4865        4874        4883        4892        4901
    GGC CTG CTT CTT CTC ACA TGA CAA AAA CTA GCC CCC ATC TCA ATC ATA TAC CAA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     G   L   L   L   L   T   W   Q   K   L   A   P   I   S   I   M   Y   Q

           4910        4919        4928        4937        4946        4955
    ATC TCT CCC TCA CTA AAC GTA AGC CTT CTC CTC ACT CTC TCA ATC TTA TCC ATC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     I   S   P   S   L   N   V   S   L   L   L   T   L   S   I   L   S   I

           4964        4973        4982        4991        5000        5009
    ATA GCA GGC AGT TGA GGT GGA TTA AAC CAA ACC CAG CTA CGC AAA ATC TTA GCA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     M   A   G   S   W   G   G   L   N   Q   T   Q   L   R   K   I   L   A

           5018        5027        5036        5045        5054        5063
    TAC TCC TCA ATT ACC CAC ATA GGA TGA ATA ATA GCA GTT CTA CCG TAC AAC CCT
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     Y   S   S   I   T   H   M   G   W   M   M   A   V   L   P   Y   N   P

           5072        5081        5090        5099        5108        5117
    AAC ATA ACC ATT CTT AAT TTA ACT ATT TAT ATT ATC CTA ACT ACT ACC GCA TTC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     N   M   T   I   L   N   L   T   I   Y   I   I   L   T   T   T   A   F

           5126        5135        5144        5153        5162        5171
    CTA CTA CTC AAC TTA AAC TCC AGC ACC ACG ACC CTA CTA CTA TCT CGC ACC TGA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     L   L   L   N   L   N   S   S   T   T   T   L   L   L   S   R   T   W

           5180        5189        5198        5207        5216        5225
    AAC AAG CTA ACA TGA CTA ACA CCC TTA ATT CCA TCC ACC CTC CTC TCC CTA GGA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     N   K   L   T   W   L   T   P   L   I   P   S   T   L   L   S   L   G

           5234        5243        5252        5261        5270        5279
    GGC CTG CCC CCG CTA ACC GGC TTT TTG CCC AAA TGG GCC ATT ATC GAA GAA TTC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     G   L   P   P   L   T   G   F   L   P   K   W   A   I   I   E   E   F

           5288        5297        5306        5315        5324        5333
    ACA AAA AAC AAT AGC CTC ATC ATC CCC ACC ATC ATA GCC ACC ATC ACC CTC CTT
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     T   K   N   N   S   L   I   I   P   T   I   M   A   T   I   T   L   L

           5342        5351        5360        5369        5378        5387
    AAC CTC TAC TTC TAC CTA CGC CTA ATC TAC TCC ACC TCA ATC ACA CTA CTC CCC
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     N   L   Y   F   Y   L   R   L   I   Y   S   T   S   I   T   L   L   P

           5396        5405        5414        5423        5432        5441
    ATA TCT AAC AAC GTA AAA ATA AAA TGA CAG TTT GAA CAT ACA AAA CCC ACC CCA
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     M   S   N   N   V   K   M   K   W   Q   F   E   H   T   K   P   T   P

           5450        5459        5468        5477        5486        5495
    TTC CTC CCC ACA CTC ATC GCC CTT ACC ACG CTA CTC CTA CCT ATC TCC CCT TTT
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
     F   L   P   T   L   I   A   L   T   T   L   L   L   P   I   S   P   F

           5504
    ATA CTA ATA ATC TTA T 3'
    --- --- --- --- --- -
     M   L   M   I   L


Nucleotide 4985A represents a corrected Cambridge sequence error per Andrews etal (1999).

* AUU normally codes for isoleucine during elongation but in ND2 codes for methionine for initiation see codon usage notes.

Amino Acid Distribution in human mtND2

ND2 (4470-5511) AA

#

%

Ala (A)

20

5.8%

Arg (R)

4

1.2%

Asn (N)

20

5.8%

Asp (D)

0

0.0%

Cys (C)

0

0.0%

Gln (Q)

10

2.9%

Glu (E)

6

1.7%

Gly (G)

13

3.7%

His (H)

4

1.2%

Ile (I)

31

8.9%

End (*)

0

0.0%

Leu1 (L)(UUA/G)

9

2.6%

Leu2 (L)(CUN)

55

15.9%

Lys (K)

12

3.5%

Met (M)

25

7.2%

phe (F)

15

4.3%

pro (p)

23

6.6%

Ser1 (S)(UCN)

23

6.6%

Ser2 (S)(AGU/C)

5

1.4%

Thr (T)

43

12.4%

Trp (W)

11

3.2%

Tyr (Y)

10

2.9%

Val (V)

8

2.3%

ND2 Total AA

347

100.0%

Acidic (Asp + Glu)

6

1.7%

basic (Arg + Lys)

16

4.6%

Aromatic (phe + Trp + Tyr)

36

10.4%

Hydrophobic (Aromatic + Ile + Leu + Met + Val)

164

47.3%

Molecular Wt

38948

Average pI

6.14



Amino acid detail: ATP6, ATP8, ND1, ND2, ND3, ND4, ND4L, ND5, ND6, CO1, CO2, CO3, CytB.

Go to the Human Mitochondrial Genetic Code.
Topic revision: r1 - 15 Sep 2015, UnknownUser
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