High Frequency Haplogroups

m.5460G>A: 4168 sequences (6.667% overall in the FL sequence set)

For all sequences containing this variant and more frequency details, click here

Lineage Top Level HG Top Level HG
Branch (ltr-num)		 HG Branch
(ltr-num-ltr)
L 928 (13.6%)L0 812 (48.0%)L0 812 (48.0%)L0a 704 (99.9%)
L4 41 (36.9%)L4 41 (36.9%)L4a 19 (100.0%)
M 1275 (9.8%)M 811 (13.2%)M7 722 (44.7%)M7b 708 (98.9%)
M52 49 (98.0%)M52a 30 (96.8%)
M52b 19 (100.0%)
Q 402 (91.4%)Q1 352 (99.7%)Q1 131 (99.2%)
Q1a 129 (100.0%)
Q1c 34 (100.0%)
Q1d 12 (100.0%)
Q1e 22 (100.0%)
Q1f 21 (100.0%)
Q2 45 (97.8%)Q2a 45 (100.0%)
N 1965 (4.6%)H 593 (4.8%)H1 503 (11.6%)H1e 494 (99.2%)
H41 33 (91.7%)H41a 32 (100.0%)
J 315 (10.2%)J1 307 (13.5%)J1b 300 (63.7%)
P 44 (10.6%)P4 37 (86.0%)P4a 36 (100.0%)
W 660 (99.2%)W 28 (100.0%)W 28 (100.0%)
W1 238 (99.2%)W1 94 (100.0%)
W1a 43 (97.7%)
W1b 25 (96.2%)
W1c 26 (100.0%)
W1e 27 (100.0%)
W3 150 (99.3%)W3a 104 (99.0%)
W3b 43 (100.0%)
W4 47 (100.0%)W4 15 (100.0%)
W4a 19 (100.0%)
W5 70 (100.0%)W5 25 (100.0%)
W5a 44 (100.0%)
W6 108 (98.2%)W6 56 (96.6%)
W6a 34 (100.0%)

All haplogroup branches containing this variant

HG Branch Sequence Count
Q1a129 (100.0%)
W194 (100.0%)
Q2a45 (100.0%)
W5a44 (100.0%)
W3b43 (100.0%)
P4a36 (100.0%)
Q1c34 (100.0%)
W6a34 (100.0%)
H41a32 (100.0%)
W28 (100.0%)
W1e27 (100.0%)
W1c26 (100.0%)
W525 (100.0%)
Q1e22 (100.0%)
Q1f21 (100.0%)
L4a19 (100.0%)
M52b19 (100.0%)
W4a19 (100.0%)
W415 (100.0%)
Q1d12 (100.0%)
W1g9 (100.0%)
W6c9 (100.0%)
W79 (100.0%)
W1h7 (100.0%)
W6b6 (100.0%)
M585 (100.0%)
W4d5 (100.0%)
W85 (100.0%)
W95 (100.0%)
G44 (100.0%)
W4b4 (100.0%)
W4c4 (100.0%)
Q1b3 (100.0%)
Q3b3 (100.0%)
W1f3 (100.0%)
W1i3 (100.0%)
W33 (100.0%)
W6d3 (100.0%)
O1a2 (100.0%)
W1d1 (100.0%)
W5b1 (100.0%)
L0a704 (99.9%)
H1e494 (99.2%)
Q1131 (99.2%)
W3a104 (99.0%)
M7b708 (98.9%)
W1a43 (97.7%)
M52a30 (96.8%)
W656 (96.6%)
W1b25 (96.2%)
J1b300 (63.7%)
HV233 (60.0%)
I6b1 (50.0%)
I71 (50.0%)
B2k2 (40.0%)
D1k2 (40.0%)
U2d10 (38.5%)
Q32 (33.3%)
HV131 (33.3%)
F2e3 (27.3%)
L3x11 (25.6%)
H411 (25.0%)
M51 (25.0%)
P3a1 (25.0%)
L4b22 (23.9%)
U6d4 (21.1%)
D1f11 (20.8%)
U1b9 (20.0%)
A2a55 (18.5%)
M501 (16.7%)
M10 (15.9%)
P4b1 (14.3%)
L3h11 (13.8%)
L0d108 (13.4%)
L5a4 (13.3%)
A11b1 (12.5%)
G21 (12.5%)
H5f1 (12.5%)
F1d10 (12.3%)
K110 (12.3%)
H331 (11.1%)
M66b1 (11.1%)
H5g1 (10.0%)
U9a1 (10.0%)
Z32 (8.7%)
C4c3 (8.6%)
G1b9 (8.3%)
M41 (8.3%)
V18a1 (8.3%)
F2c1 (7.7%)
H2b3 (7.5%)
M21b7 (7.3%)
B2y1 (5.9%)
I2 (5.7%)
M5c1 (5.6%)
HV8 (4.6%)
B4e1 (4.5%)
R8b2 (4.2%)
R9b7 (4.1%)
K1a50 (3.9%)
HG Branch Sequence Count
P1d6 (3.9%)
L1c23 (3.7%)
E2a2 (3.7%)
D1a1 (3.7%)
M24a1 (3.6%)
A217 (3.5%)
A2h1 (3.3%)
I1a7 (3.2%)
M39b1 (3.2%)
R0a9 (3.0%)
M3d1 (3.0%)
K2b3 (2.8%)
H16 (2.7%)
C1d6 (2.7%)
H14b1 (2.5%)
B5a16 (2.4%)
H3b2 (2.4%)
D42 (2.3%)
F3a2 (2.3%)
D4g2 (2.2%)
M71a1 (2.2%)
J2b8 (2.1%)
V7 (2.0%)
HV1b1 (1.9%)
M7c14 (1.8%)
U2e7 (1.8%)
G2b1 (1.8%)
H271 (1.8%)
H6a7 (1.7%)
HV2a1 (1.7%)
U3b4 (1.6%)
N1a3 (1.6%)
R221 (1.6%)
U8b1 (1.6%)
C4a7 (1.5%)
T2e2 (1.4%)
A5a1 (1.4%)
F4b1 (1.4%)
M12a1 (1.4%)
M301 (1.4%)
L3e13 (1.3%)
H38 (1.3%)
H15a1 (1.3%)
D4c1 (1.2%)
M74b1 (1.2%)
X2b3 (1.1%)
V7a1 (1.1%)
U5a12 (1.0%)
H2a9 (1.0%)
U4a4 (1.0%)
H7a1 (1.0%)
B4a20 (0.9%)
H51 (0.9%)
M8a1 (0.9%)
U8a1 (0.9%)
U5b10 (0.8%)
U7b1 (0.8%)
B4b2 (0.7%)
D12 (0.7%)
L3f2 (0.7%)
L2b1 (0.7%)
M2a1 (0.7%)
L2a7 (0.6%)
T1a5 (0.6%)
B23 (0.6%)
C1b3 (0.6%)
N9a2 (0.6%)
D4a1 (0.6%)
F1b1 (0.6%)
F1f1 (0.6%)
L2c1 (0.6%)
M5a1 (0.6%)
N1b1 (0.6%)
U1a1 (0.6%)
H1a5 (0.5%)
T2b5 (0.5%)
M1a1 (0.5%)
U4b1 (0.5%)
J1c7 (0.4%)
H5a2 (0.4%)
B2b1 (0.4%)
F3b1 (0.4%)
K1c1 (0.4%)
K2a1 (0.4%)
M231 (0.4%)
T2a1 (0.4%)
D4b1 (0.3%)
D4j1 (0.3%)
H13a1 (0.3%)
H4a1 (0.3%)
M9a1 (0.3%)
U6a1 (0.3%)
U7a1 (0.3%)
F1a2 (0.2%)
H12 (0.2%)
H1b1 (0.2%)
L3b1 (0.2%)
L3d1 (0.2%)
H1c1 (0.1%)
Total 4168