| Lineage | Top Level HG | Top Level HG Branch (ltr-num) |
HG Branch (ltr-num-ltr) |
|---|---|---|---|
| L 7181 (99.7%) | L0 1731 (99.7%) | L0 1731 (99.7%) | L0a 747 (99.7%) L0d 801 (99.8%) L0f 52 (100.0%) L0g 10 (100.0%) L0k 119 (99.2%) |
| L1 1009 (99.2%) | L1 1009 (99.2%) | L1b 383 (99.0%) L1c 626 (99.4%) | |
| L2 1678 (99.9%) | L2 1678 (99.9%) | L2 14 (100.0%) L2a 1296 (99.9%) L2b 144 (100.0%) L2c 169 (100.0%) L2d 28 (100.0%) L2e 27 (100.0%) | |
| L3 2560 (99.8%) | L3 2560 (99.8%) | L3a 30 (100.0%) L3b 484 (100.0%) L3d 464 (99.8%) L3e 1026 (99.9%) L3f 337 (99.4%) L3h 101 (100.0%) L3i 43 (100.0%) L3k 20 (100.0%) L3x 49 (100.0%) | |
| L4 133 (100.0%) | L4 133 (100.0%) | L4a 20 (100.0%) L4b 113 (100.0%) | |
| L5 56 (100.0%) | L5 56 (100.0%) | L5a 38 (100.0%) L5b 18 (100.0%) | |
| L6 14 (100.0%) | L6 14 (100.0%) | ||
| M 13719 (99.4%) | C 2197 (99.9%) | C 19 (100.0%) | C 19 (100.0%) |
| C1 952 (99.9%) | C1b 511 (100.0%) C1c 208 (100.0%) C1d 219 (99.5%) | ||
| C4 791 (99.7%) | C4 16 (100.0%) C4a 460 (100.0%) C4b 273 (100.0%) C4c 33 (94.3%) | ||
| C5 218 (100.0%) | C5a 93 (100.0%) C5b 44 (100.0%) C5c 41 (100.0%) C5d 39 (100.0%) | ||
| C7 216 (100.0%) | C7 41 (100.0%) C7a 168 (100.0%) | ||
| D 2867 (99.5%) | D1 519 (99.6%) | D1 307 (99.4%) D1a 27 (100.0%) D1e 19 (100.0%) D1f 53 (100.0%) D1g 36 (100.0%) D1h 10 (100.0%) D1j 37 (100.0%) | |
| D2 99 (100.0%) | D2 11 (100.0%) D2a 64 (100.0%) D2b 22 (100.0%) | ||
| D3 45 (100.0%) | D3 45 (100.0%) | ||
| D4 1735 (99.3%) | D4 90 (96.8%) D4a 190 (100.0%) D4b 306 (99.7%) D4c 81 (100.0%) D4e 221 (98.7%) D4f 17 (94.4%) D4g 94 (100.0%) D4h 128 (99.2%) D4i 47 (97.9%) D4j 320 (99.4%) D4l 43 (100.0%) D4m 40 (100.0%) D4n 18 (100.0%) D4o 69 (100.0%) D4p 12 (100.0%) D4q 29 (100.0%) D4s 13 (100.0%) | ||
| D5 435 (99.8%) | D5a 240 (100.0%) D5b 170 (100.0%) D5c 25 (100.0%) | ||
| D6 34 (100.0%) | D6a 19 (100.0%) D6c 15 (100.0%) | ||
| E 495 (99.8%) | E1 402 (99.8%) | E1a 401 (99.8%) | |
| E2 93 (100.0%) | E2a 59 (100.0%) E2b 32 (100.0%) | ||
| G 645 (99.8%) | G 13 (100.0%) | G 13 (100.0%) | |
| G1 207 (100.0%) | G1a 82 (100.0%) G1b 108 (100.0%) G1c 16 (100.0%) | ||
| G2 359 (99.7%) | G2a 283 (100.0%) G2b 57 (98.3%) G2c 11 (100.0%) | ||
| G3 62 (100.0%) | G3a 44 (100.0%) G3b 18 (100.0%) | ||
| M 6383 (99.3%) | M 63 (98.4%) | M 63 (98.4%) | |
| M1 310 (99.4%) | M1 17 (100.0%) M1a 238 (99.2%) M1b 55 (100.0%) | ||
| M2 237 (91.9%) | M2a 129 (92.8%) M2b 103 (96.3%) | ||
| M3 220 (99.5%) | M3a 115 (100.0%) M3c 54 (98.2%) M3d 36 (100.0%) | ||
| M4 35 (97.2%) | M4 14 (93.3%) M4a 19 (100.0%) | ||
| M5 247 (99.2%) | M5a 187 (98.9%) M5b 31 (100.0%) M5c 21 (100.0%) | ||
| M6 41 (97.6%) | M6 11 (100.0%) M6a 30 (96.8%) | ||
| M7 1637 (99.9%) | M7a 106 (100.0%) M7b 734 (99.9%) M7c 797 (99.9%) | ||
| M8 111 (100.0%) | M8a 110 (100.0%) | ||
| M9 358 (100.0%) | M9a 354 (100.0%) | ||
| M10 78 (100.0%) | M10a 70 (100.0%) | ||
| M11 43 (100.0%) | M11a 26 (100.0%) M11b 10 (100.0%) | ||
| M12 145 (100.0%) | M12a 73 (100.0%) M12b 70 (100.0%) | ||
| M13 77 (100.0%) | M13a 44 (100.0%) M13b 15 (100.0%) M13c 17 (100.0%) | ||
| M17 67 (100.0%) | M17a 21 (100.0%) M17c 45 (100.0%) | ||
| M18 34 (100.0%) | M18a 22 (100.0%) | ||
| M20 82 (100.0%) | M20 82 (100.0%) | ||
| M21 134 (100.0%) | M21a 38 (100.0%) M21b 96 (100.0%) | ||
| M22 13 (100.0%) | |||
| M23 233 (100.0%) | M23 233 (100.0%) | ||
| M24 63 (100.0%) | M24a 28 (100.0%) M24b 32 (100.0%) | ||
| M26 11 (100.0%) | M26 11 (100.0%) | ||
| M27 158 (100.0%) | M27a 60 (100.0%) M27b 66 (100.0%) M27c 32 (100.0%) | ||
| M28 129 (100.0%) | M28a 117 (100.0%) M28b 10 (100.0%) | ||
| M29 25 (100.0%) | M29b 18 (100.0%) | ||
| M30 153 (96.8%) | M30 73 (93.6%) M30b 12 (100.0%) M30c 27 (100.0%) M30d 16 (100.0%) | ||
| M31 27 (90.0%) | M31a 24 (96.0%) | ||
| M32 166 (100.0%) | M32a 10 (100.0%) M32c 149 (100.0%) | ||
| M33 91 (97.8%) | M33a 46 (97.9%) M33b 16 (94.1%) M33c 21 (100.0%) | ||
| M34 11 (100.0%) | |||
| M35 114 (99.1%) | M35a 41 (100.0%) M35b 63 (98.4%) | ||
| M36 40 (100.0%) | M36d 28 (100.0%) | ||
| M37 39 (100.0%) | M37a 20 (100.0%) M37e 14 (100.0%) | ||
| M38 28 (100.0%) | |||
| M39 45 (100.0%) | M39b 32 (100.0%) | ||
| M40 30 (96.8%) | M40a 28 (96.6%) | ||
| M41 12 (100.0%) | |||
| M42 75 (100.0%) | M42 28 (100.0%) M42a 29 (100.0%) M42b 18 (100.0%) | ||
| M44 12 (100.0%) | M44a 11 (100.0%) | ||
| M45 30 (96.8%) | M45 11 (100.0%) M45a 19 (95.0%) | ||
| M46 16 (100.0%) | |||
| M49 42 (100.0%) | M49a 16 (100.0%) M49c 13 (100.0%) | ||
| M50 33 (100.0%) | M50a 27 (100.0%) | ||
| M51 75 (100.0%) | M51a 54 (100.0%) M51b 21 (100.0%) | ||
| M52 54 (100.0%) | M52a 34 (100.0%) M52b 19 (100.0%) | ||
| M53 26 (96.3%) | M53b 24 (100.0%) | ||
| M54 11 (100.0%) | M54 11 (100.0%) | ||
| M55 14 (100.0%) | M55 14 (100.0%) | ||
| M57 17 (100.0%) | |||
| M60 14 (100.0%) | M60a 10 (100.0%) | ||
| M61 26 (100.0%) | M61 17 (100.0%) | ||
| M62 27 (100.0%) | M62b 22 (100.0%) | ||
| M65 55 (98.2%) | M65a 42 (97.7%) M65b 11 (100.0%) | ||
| M66 14 (100.0%) | |||
| M68 35 (100.0%) | M68a 34 (100.0%) | ||
| M69 15 (100.0%) | M69a 14 (100.0%) | ||
| M70 13 (100.0%) | M70 13 (100.0%) | ||
| M71 114 (99.1%) | M71 55 (100.0%) M71a 45 (97.8%) | ||
| M72 22 (100.0%) | M72a 18 (100.0%) | ||
| M73 55 (100.0%) | M73 19 (100.0%) M73a 16 (100.0%) M73b 20 (100.0%) | ||
| M74 136 (100.0%) | M74a 40 (100.0%) M74b 88 (100.0%) | ||
| M76 35 (100.0%) | M76 25 (100.0%) M76a 10 (100.0%) | ||
| M91 25 (100.0%) | M91a 20 (100.0%) | ||
| Q 838 (99.8%) | Q1 678 (99.7%) | Q1 293 (99.3%) Q1a 265 (100.0%) Q1b 13 (100.0%) Q1c 39 (100.0%) Q1d 18 (100.0%) Q1e 27 (100.0%) Q1f 23 (100.0%) | |
| Q2 72 (100.0%) | Q2a 71 (100.0%) | ||
| Q3 88 (100.0%) | Q3 13 (100.0%) Q3a 71 (100.0%) | ||
| Z 294 (97.7%) | Z1 114 (100.0%) | Z1a 110 (100.0%) | |
| Z3 119 (94.4%) | Z3 26 (100.0%) Z3a 64 (90.1%) Z3d 12 (100.0%) | ||
| Z4 40 (100.0%) | Z4 11 (100.0%) Z4a 29 (100.0%) |
| HG Branch | Sequence Count |
|---|---|
| C1b | 511 (100.0%) |
| L3b | 484 (100.0%) |
| C4a | 460 (100.0%) |
| M9a | 354 (100.0%) |
| G2a | 283 (100.0%) |
| C4b | 273 (100.0%) |
| Q1a | 265 (100.0%) |
| D5a | 240 (100.0%) |
| M23 | 233 (100.0%) |
| C1c | 208 (100.0%) |
| D4a | 190 (100.0%) |
| D5b | 170 (100.0%) |
| L2c | 169 (100.0%) |
| C7a | 168 (100.0%) |
| M32c | 149 (100.0%) |
| L2b | 144 (100.0%) |
| M28a | 117 (100.0%) |
| M3a | 115 (100.0%) |
| L4b | 113 (100.0%) |
| M8a | 110 (100.0%) |
| Z1a | 110 (100.0%) |
| G1b | 108 (100.0%) |
| M7a | 106 (100.0%) |
| L3h | 101 (100.0%) |
| M21b | 96 (100.0%) |
| D4g | 94 (100.0%) |
| C5a | 93 (100.0%) |
| M74b | 88 (100.0%) |
| G1a | 82 (100.0%) |
| M20 | 82 (100.0%) |
| D4c | 81 (100.0%) |
| M12a | 73 (100.0%) |
| Q2a | 71 (100.0%) |
| Q3a | 71 (100.0%) |
| M10a | 70 (100.0%) |
| M12b | 70 (100.0%) |
| D4o | 69 (100.0%) |
| M27b | 66 (100.0%) |
| D2a | 64 (100.0%) |
| M27a | 60 (100.0%) |
| E2a | 59 (100.0%) |
| M1b | 55 (100.0%) |
| M71 | 55 (100.0%) |
| M51a | 54 (100.0%) |
| D1f | 53 (100.0%) |
| L0f | 52 (100.0%) |
| L3x | 49 (100.0%) |
| D3 | 45 (100.0%) |
| M17c | 45 (100.0%) |
| C5b | 44 (100.0%) |
| G3a | 44 (100.0%) |
| M13a | 44 (100.0%) |
| D4l | 43 (100.0%) |
| L3i | 43 (100.0%) |
| C5c | 41 (100.0%) |
| C7 | 41 (100.0%) |
| M35a | 41 (100.0%) |
| D4m | 40 (100.0%) |
| M74a | 40 (100.0%) |
| C5d | 39 (100.0%) |
| Q1c | 39 (100.0%) |
| L5a | 38 (100.0%) |
| M21a | 38 (100.0%) |
| D1j | 37 (100.0%) |
| D1g | 36 (100.0%) |
| M3d | 36 (100.0%) |
| M52a | 34 (100.0%) |
| M68a | 34 (100.0%) |
| E2b | 32 (100.0%) |
| M24b | 32 (100.0%) |
| M27c | 32 (100.0%) |
| M39b | 32 (100.0%) |
| M5b | 31 (100.0%) |
| L3a | 30 (100.0%) |
| D4q | 29 (100.0%) |
| M42a | 29 (100.0%) |
| Z4a | 29 (100.0%) |
| L2d | 28 (100.0%) |
| M24a | 28 (100.0%) |
| M36d | 28 (100.0%) |
| M42 | 28 (100.0%) |
| D1a | 27 (100.0%) |
| L2e | 27 (100.0%) |
| M30c | 27 (100.0%) |
| M50a | 27 (100.0%) |
| Q1e | 27 (100.0%) |
| M11a | 26 (100.0%) |
| Z3 | 26 (100.0%) |
| D5c | 25 (100.0%) |
| M76 | 25 (100.0%) |
| M53b | 24 (100.0%) |
| Q1f | 23 (100.0%) |
| D2b | 22 (100.0%) |
| M18a | 22 (100.0%) |
| M62b | 22 (100.0%) |
| M17a | 21 (100.0%) |
| M33c | 21 (100.0%) |
| M51b | 21 (100.0%) |
| M5c | 21 (100.0%) |
| L3k | 20 (100.0%) |
| L4a | 20 (100.0%) |
| M37a | 20 (100.0%) |
| M73b | 20 (100.0%) |
| M91a | 20 (100.0%) |
| C | 19 (100.0%) |
| D1e | 19 (100.0%) |
| D6a | 19 (100.0%) |
| M4a | 19 (100.0%) |
| M52b | 19 (100.0%) |
| M73 | 19 (100.0%) |
| D4n | 18 (100.0%) |
| G3b | 18 (100.0%) |
| L5b | 18 (100.0%) |
| M29b | 18 (100.0%) |
| M42b | 18 (100.0%) |
| M72a | 18 (100.0%) |
| Q1d | 18 (100.0%) |
| M1 | 17 (100.0%) |
| M13c | 17 (100.0%) |
| M61 | 17 (100.0%) |
| C4 | 16 (100.0%) |
| G1c | 16 (100.0%) |
| M30d | 16 (100.0%) |
| M49a | 16 (100.0%) |
| M73a | 16 (100.0%) |
| D6c | 15 (100.0%) |
| M13b | 15 (100.0%) |
| L2 | 14 (100.0%) |
| M37e | 14 (100.0%) |
| M55 | 14 (100.0%) |
| M69a | 14 (100.0%) |
| D4s | 13 (100.0%) |
| G | 13 (100.0%) |
| M49c | 13 (100.0%) |
| M70 | 13 (100.0%) |
| Q1b | 13 (100.0%) |
| Q3 | 13 (100.0%) |
| D4p | 12 (100.0%) |
| M30b | 12 (100.0%) |
| Z3d | 12 (100.0%) |
| D2 | 11 (100.0%) |
| G2c | 11 (100.0%) |
| M26 | 11 (100.0%) |
| M44a | 11 (100.0%) |
| M45 | 11 (100.0%) |
| M54 | 11 (100.0%) |
| M6 | 11 (100.0%) |
| M65b | 11 (100.0%) |
| Z4 | 11 (100.0%) |
| D1h | 10 (100.0%) |
| L0g | 10 (100.0%) |
| M11b | 10 (100.0%) |
| M28b | 10 (100.0%) |
| M32a | 10 (100.0%) |
| M60a | 10 (100.0%) |
| M76a | 10 (100.0%) |
| C1a | 9 (100.0%) |
| M22a | 9 (100.0%) |
| M25 | 9 (100.0%) |
| M3 | 9 (100.0%) |
| M39a | 9 (100.0%) |
| M46a | 9 (100.0%) |
| M61a | 9 (100.0%) |
| M66b | 9 (100.0%) |
| Z2 | 9 (100.0%) |
| Z3b | 9 (100.0%) |
| Z7 | 9 (100.0%) |
| D4k | 8 (100.0%) |
| G2 | 8 (100.0%) |
| L6a | 8 (100.0%) |
| M10 | 8 (100.0%) |
| M30a | 8 (100.0%) |
| M34a | 8 (100.0%) |
| M38 | 8 (100.0%) |
| M59 | 8 (100.0%) |
| M71c | 8 (100.0%) |
| M74 | 8 (100.0%) |
| M75 | 8 (100.0%) |
| M79 | 8 (100.0%) |
| Z3c | 8 (100.0%) |
| C7b | 7 (100.0%) |
| D1d | 7 (100.0%) |
| D4t | 7 (100.0%) |
| M29a | 7 (100.0%) |
| HG Branch | Sequence Count |
|---|---|
| M32 | 7 (100.0%) |
| M33d | 7 (100.0%) |
| M36c | 7 (100.0%) |
| M38c | 7 (100.0%) |
| M46 | 7 (100.0%) |
| M49e | 7 (100.0%) |
| M57a | 7 (100.0%) |
| M57b | 7 (100.0%) |
| C4d | 6 (100.0%) |
| D1i | 6 (100.0%) |
| L6b | 6 (100.0%) |
| M18b | 6 (100.0%) |
| M30e | 6 (100.0%) |
| M30f | 6 (100.0%) |
| M35 | 6 (100.0%) |
| M38b | 6 (100.0%) |
| M3b | 6 (100.0%) |
| M50 | 6 (100.0%) |
| M63 | 6 (100.0%) |
| M64 | 6 (100.0%) |
| M71b | 6 (100.0%) |
| M77 | 6 (100.0%) |
| C1 | 5 (100.0%) |
| D1c | 5 (100.0%) |
| D1k | 5 (100.0%) |
| M2c | 5 (100.0%) |
| M30g | 5 (100.0%) |
| M38a | 5 (100.0%) |
| M41a | 5 (100.0%) |
| M58 | 5 (100.0%) |
| M62a | 5 (100.0%) |
| M91b | 5 (100.0%) |
| G4 | 4 (100.0%) |
| M11d | 4 (100.0%) |
| M18 | 4 (100.0%) |
| M19 | 4 (100.0%) |
| M22b | 4 (100.0%) |
| M35c | 4 (100.0%) |
| M43a | 4 (100.0%) |
| M43b | 4 (100.0%) |
| M49d | 4 (100.0%) |
| M5 | 4 (100.0%) |
| M5d | 4 (100.0%) |
| M66a | 4 (100.0%) |
| M72 | 4 (100.0%) |
| M9b | 4 (100.0%) |
| Q3b | 4 (100.0%) |
| Z1 | 4 (100.0%) |
| C4e | 3 (100.0%) |
| D1b | 3 (100.0%) |
| L3c | 3 (100.0%) |
| M11c | 3 (100.0%) |
| M24 | 3 (100.0%) |
| M37 | 3 (100.0%) |
| M39c | 3 (100.0%) |
| M41b | 3 (100.0%) |
| M41c | 3 (100.0%) |
| M57 | 3 (100.0%) |
| M60b | 3 (100.0%) |
| M81 | 3 (100.0%) |
| D1m | 2 (100.0%) |
| D1n | 2 (100.0%) |
| D2c | 2 (100.0%) |
| D4d | 2 (100.0%) |
| E2 | 2 (100.0%) |
| L0b | 2 (100.0%) |
| M12 | 2 (100.0%) |
| M14 | 2 (100.0%) |
| M15 | 2 (100.0%) |
| M18c | 2 (100.0%) |
| M28 | 2 (100.0%) |
| M34b | 2 (100.0%) |
| M36 | 2 (100.0%) |
| M36a | 2 (100.0%) |
| M37d | 2 (100.0%) |
| M40 | 2 (100.0%) |
| M48 | 2 (100.0%) |
| M49 | 2 (100.0%) |
| M4b | 2 (100.0%) |
| M56 | 2 (100.0%) |
| M65 | 2 (100.0%) |
| M67 | 2 (100.0%) |
| M80 | 2 (100.0%) |
| Z | 2 (100.0%) |
| C5 | 1 (100.0%) |
| CZ | 1 (100.0%) |
| E1 | 1 (100.0%) |
| G1 | 1 (100.0%) |
| M13 | 1 (100.0%) |
| M17 | 1 (100.0%) |
| M31c | 1 (100.0%) |
| M33 | 1 (100.0%) |
| M34 | 1 (100.0%) |
| M36b | 1 (100.0%) |
| M38d | 1 (100.0%) |
| M38e | 1 (100.0%) |
| M39 | 1 (100.0%) |
| M41 | 1 (100.0%) |
| M43 | 1 (100.0%) |
| M44 | 1 (100.0%) |
| M47 | 1 (100.0%) |
| M52 | 1 (100.0%) |
| M60 | 1 (100.0%) |
| M66 | 1 (100.0%) |
| M68 | 1 (100.0%) |
| M69 | 1 (100.0%) |
| M8 | 1 (100.0%) |
| Q2b | 1 (100.0%) |
| Z5 | 1 (100.0%) |
| L2a | 1296 (99.9%) |
| L3e | 1026 (99.9%) |
| M7c | 797 (99.9%) |
| M7b | 734 (99.9%) |
| L0d | 801 (99.8%) |
| L3d | 464 (99.8%) |
| E1a | 401 (99.8%) |
| L0a | 747 (99.7%) |
| D4b | 306 (99.7%) |
| C1d | 219 (99.5%) |
| L1c | 626 (99.4%) |
| L3f | 337 (99.4%) |
| D4j | 320 (99.4%) |
| D1 | 307 (99.4%) |
| Q1 | 293 (99.3%) |
| M1a | 238 (99.2%) |
| D4h | 128 (99.2%) |
| L0k | 119 (99.2%) |
| L1b | 383 (99.0%) |
| M5a | 187 (98.9%) |
| D4e | 221 (98.7%) |
| M | 63 (98.4%) |
| M35b | 63 (98.4%) |
| G2b | 57 (98.3%) |
| M3c | 54 (98.2%) |
| D4i | 47 (97.9%) |
| M33a | 46 (97.9%) |
| M71a | 45 (97.8%) |
| M65a | 42 (97.7%) |
| D4 | 90 (96.8%) |
| M6a | 30 (96.8%) |
| M40a | 28 (96.6%) |
| M2b | 103 (96.3%) |
| M31a | 24 (96.0%) |
| M45a | 19 (95.0%) |
| D4f | 17 (94.4%) |
| C4c | 33 (94.3%) |
| M33b | 16 (94.1%) |
| M30 | 73 (93.6%) |
| M4 | 14 (93.3%) |
| M2a | 129 (92.8%) |
| Z3a | 64 (90.1%) |
| L3 | 3 (75.0%) |
| M53 | 2 (66.7%) |
| M31b | 2 (50.0%) |
| H3r | 5 (29.4%) |
| A15 | 1 (20.0%) |
| N5a | 1 (14.3%) |
| U2a | 2 (6.7%) |
| F2b | 2 (6.2%) |
| P1f | 1 (5.3%) |
| A | 5 (4.8%) |
| HV0f | 1 (4.8%) |
| A17 | 2 (4.2%) |
| A5b | 1 (3.8%) |
| B2o | 1 (3.3%) |
| J1b | 13 (2.7%) |
| R2 | 1 (2.6%) |
| F1d | 2 (2.4%) |
| R5a | 1 (1.6%) |
| F1c | 1 (1.4%) |
| U4a | 5 (1.2%) |
| A2 | 4 (0.8%) |
| T1a | 5 (0.6%) |
| R9b | 1 (0.6%) |
| H | 3 (0.5%) |
| B2b | 1 (0.4%) |
| F3b | 1 (0.4%) |
| H2a | 2 (0.2%) |
| K1a | 2 (0.1%) |
| J1c | 1 (0.1%) |
| U5a | 1 (0.1%) |
| B4a | 1 (0.0%) |
| Total | 20967 |