| Lineage | Top Level HG | Top Level HG Branch (ltr-num) |
HG Branch (ltr-num-ltr) |
|---|---|---|---|
| L 748 (10.9%) | L3 465 (19.1%) | L3 465 (19.1%) | L3b 441 (95.9%) |
| L4 105 (94.6%) | L4 105 (94.6%) | L4a 16 (84.2%) L4b 89 (96.7%) | |
| L5 28 (73.7%) | L5 28 (73.7%) | L5a 28 (93.3%) | |
| M 5260 (40.6%) | D 2753 (98.1%) | D1 473 (95.4%) | D1 270 (94.7%) D1a 22 (81.5%) D1e 18 (94.7%) D1f 51 (96.2%) D1g 36 (100.0%) D1j 37 (100.0%) |
| D2 99 (98.0%) | D2 11 (100.0%) D2a 64 (100.0%) D2b 22 (100.0%) | ||
| D3 45 (100.0%) | D3 45 (100.0%) | ||
| D4 1681 (98.7%) | D4 84 (97.7%) D4a 179 (99.4%) D4b 293 (98.3%) D4c 80 (98.8%) D4e 221 (99.5%) D4f 17 (94.4%) D4g 90 (98.9%) D4h 125 (100.0%) D4i 48 (100.0%) D4j 315 (99.7%) D4l 42 (97.7%) D4m 39 (100.0%) D4n 18 (100.0%) D4o 69 (100.0%) D4p 12 (100.0%) D4q 28 (100.0%) D4s 13 (100.0%) | ||
| D5 421 (98.6%) | D5a 228 (97.9%) D5b 169 (100.0%) D5c 23 (95.8%) | ||
| D6 34 (100.0%) | D6a 19 (100.0%) D6c 15 (100.0%) | ||
| E 473 (99.4%) | E1 385 (99.2%) | E1a 384 (99.2%) | |
| E2 88 (100.0%) | E2a 54 (100.0%) E2b 32 (100.0%) | ||
| G 507 (80.7%) | G 11 (100.0%) | G 11 (100.0%) | |
| G1 95 (46.6%) | G1a 80 (98.8%) G1c 15 (100.0%) | ||
| G2 347 (99.7%) | G2a 272 (99.6%) G2b 56 (100.0%) G2c 11 (100.0%) | ||
| G3 50 (82.0%) | G3a 32 (74.4%) G3b 18 (100.0%) | ||
| M 1408 (23.0%) | M6 35 (100.0%) | M6a 28 (100.0%) | |
| M7 532 (32.9%) | M7c 517 (65.0%) | ||
| M9 329 (92.4%) | M9a 325 (92.3%) | ||
| M21 27 (20.1%) | M21a 26 (68.4%) | ||
| M28 61 (98.4%) | M28a 55 (98.2%) | ||
| M33 39 (41.9%) | M33b 17 (100.0%) M33c 21 (100.0%) | ||
| M46 15 (93.8%) | |||
| M61 26 (100.0%) | M61 17 (100.0%) | ||
| M68 34 (97.1%) | M68a 34 (100.0%) | ||
| M74 128 (100.0%) | M74a 37 (100.0%) M74b 83 (100.0%) | ||
| M76 34 (100.0%) | M76 25 (100.0%) | ||
| Q 32 (7.3%) | Q1 24 (6.8%) | Q1d 7 (58.3%) | |
| N 4431 (10.4%) | A 1464 (83.3%) | A 86 (87.8%) | A 86 (87.8%) |
| A1 14 (100.0%) | A1a 13 (100.0%) | ||
| A2 1095 (93.7%) | A2 465 (96.5%) A2a 278 (93.6%) A2b 54 (100.0%) A2d 25 (86.2%) A2f 22 (95.7%) A2g 15 (88.2%) A2h 15 (50.0%) A2i 17 (89.5%) A2j 11 (91.7%) A2k 13 (100.0%) A2l 14 (100.0%) A2m 12 (100.0%) A2p 15 (93.8%) A2q 14 (82.4%) A2u 12 (100.0%) A2v 20 (100.0%) A2w 34 (100.0%) A2y 13 (92.9%) | ||
| A6 18 (100.0%) | |||
| A12 11 (84.6%) | A12a 11 (100.0%) | ||
| A13 26 (100.0%) | A13 26 (100.0%) | ||
| A14 38 (100.0%) | A14 38 (100.0%) | ||
| A15 75 (97.4%) | A15a 12 (92.3%) A15c 56 (98.2%) | ||
| A17 46 (100.0%) | A17 46 (100.0%) | ||
| A21 13 (100.0%) | A21 13 (100.0%) | ||
| F 398 (19.6%) | F3 318 (100.0%) | F3a 88 (100.0%) F3b 230 (100.0%) | |
| H 824 (6.6%) | H6 468 (97.3%) | H6a 414 (98.1%) H6b 28 (100.0%) H6c 25 (83.3%) | |
| H8 67 (97.1%) | H8a 11 (100.0%) H8b 22 (95.7%) H8c 29 (96.7%) | ||
| I 37 (3.9%) | I1 27 (8.2%) | I1c 21 (100.0%) | |
| K 126 (5.6%) | K1 119 (6.3%) | K1 50 (61.7%) K1d 11 (84.6%) | |
| N 48 (5.0%) | N10 26 (81.2%) | N10a 19 (100.0%) | |
| P 52 (12.5%) | P3 9 (40.9%) | P3b 9 (50.0%) | |
| R 437 (33.1%) | R0 297 (94.3%) | R0a 293 (98.7%) | |
| R6 32 (100.0%) | R6a 24 (100.0%) | ||
| R7 27 (96.4%) | R7a 17 (100.0%) | ||
| T 84 (2.8%) | T2 59 (2.7%) | T2i 18 (100.0%) | |
| U 654 (11.3%) | U2 343 (60.4%) | U2e 342 (86.6%) | |
| W 49 (7.4%) | W5 42 (60.0%) | W5a 42 (95.5%) |
| HG Branch | Sequence Count |
|---|---|
| F3b | 230 (100.0%) |
| D5b | 169 (100.0%) |
| D4h | 125 (100.0%) |
| F3a | 88 (100.0%) |
| M74b | 83 (100.0%) |
| D4o | 69 (100.0%) |
| D2a | 64 (100.0%) |
| G2b | 56 (100.0%) |
| A2b | 54 (100.0%) |
| E2a | 54 (100.0%) |
| D4i | 48 (100.0%) |
| A17 | 46 (100.0%) |
| D3 | 45 (100.0%) |
| D4m | 39 (100.0%) |
| A14 | 38 (100.0%) |
| D1j | 37 (100.0%) |
| M74a | 37 (100.0%) |
| D1g | 36 (100.0%) |
| A2w | 34 (100.0%) |
| M68a | 34 (100.0%) |
| E2b | 32 (100.0%) |
| D4q | 28 (100.0%) |
| H6b | 28 (100.0%) |
| M6a | 28 (100.0%) |
| A13 | 26 (100.0%) |
| M76 | 25 (100.0%) |
| R6a | 24 (100.0%) |
| D2b | 22 (100.0%) |
| I1c | 21 (100.0%) |
| M33c | 21 (100.0%) |
| A2v | 20 (100.0%) |
| D6a | 19 (100.0%) |
| N10a | 19 (100.0%) |
| D4n | 18 (100.0%) |
| G3b | 18 (100.0%) |
| T2i | 18 (100.0%) |
| M33b | 17 (100.0%) |
| M61 | 17 (100.0%) |
| R7a | 17 (100.0%) |
| D6c | 15 (100.0%) |
| G1c | 15 (100.0%) |
| A2l | 14 (100.0%) |
| A1a | 13 (100.0%) |
| A21 | 13 (100.0%) |
| A2k | 13 (100.0%) |
| D4s | 13 (100.0%) |
| A2m | 12 (100.0%) |
| A2u | 12 (100.0%) |
| D4p | 12 (100.0%) |
| A12a | 11 (100.0%) |
| D2 | 11 (100.0%) |
| G | 11 (100.0%) |
| G2c | 11 (100.0%) |
| H8a | 11 (100.0%) |
| A2n | 9 (100.0%) |
| A2z | 9 (100.0%) |
| A6 | 9 (100.0%) |
| D1h | 9 (100.0%) |
| M61a | 9 (100.0%) |
| M76a | 9 (100.0%) |
| R7b | 9 (100.0%) |
| A25 | 8 (100.0%) |
| G2 | 8 (100.0%) |
| M71c | 8 (100.0%) |
| M74 | 8 (100.0%) |
| D1d | 7 (100.0%) |
| M46 | 7 (100.0%) |
| M6 | 7 (100.0%) |
| A16 | 6 (100.0%) |
| A24 | 6 (100.0%) |
| A26 | 6 (100.0%) |
| A2t | 6 (100.0%) |
| D1i | 6 (100.0%) |
| D4t | 6 (100.0%) |
| M28b | 6 (100.0%) |
| A2o | 5 (100.0%) |
| A6b | 5 (100.0%) |
| D1c | 5 (100.0%) |
| D1k | 5 (100.0%) |
| H8 | 5 (100.0%) |
| K1e | 5 (100.0%) |
| R6 | 5 (100.0%) |
| A15 | 4 (100.0%) |
| A22 | 4 (100.0%) |
| A2x | 4 (100.0%) |
| A6a | 4 (100.0%) |
| G4 | 4 (100.0%) |
| M19 | 4 (100.0%) |
| M9b | 4 (100.0%) |
| A15b | 3 (100.0%) |
| A19 | 3 (100.0%) |
| A20 | 3 (100.0%) |
| A23 | 3 (100.0%) |
| D1b | 3 (100.0%) |
| N10b | 3 (100.0%) |
| Q3b | 3 (100.0%) |
| R0b | 3 (100.0%) |
| R6b | 3 (100.0%) |
| A18 | 2 (100.0%) |
| D1m | 2 (100.0%) |
| D1n | 2 (100.0%) |
| D4d | 2 (100.0%) |
| E2 | 2 (100.0%) |
| HV1d | 2 (100.0%) |
| M15 | 2 (100.0%) |
| O1a | 2 (100.0%) |
| P6 | 2 (100.0%) |
| P8 | 2 (100.0%) |
| R14 | 2 (100.0%) |
| A1 | 1 (100.0%) |
| A2s | 1 (100.0%) |
| D5 | 1 (100.0%) |
| E1 | 1 (100.0%) |
| H6 | 1 (100.0%) |
| K1f | 1 (100.0%) |
| M33 | 1 (100.0%) |
| O1 | 1 (100.0%) |
| V19 | 1 (100.0%) |
| D4j | 315 (99.7%) |
| G2a | 272 (99.6%) |
| D4e | 221 (99.5%) |
| D4a | 179 (99.4%) |
| E1a | 384 (99.2%) |
| D4g | 90 (98.9%) |
| D4c | 80 (98.8%) |
| G1a | 80 (98.8%) |
| R0a | 293 (98.7%) |
| D4b | 293 (98.3%) |
| A15c | 56 (98.2%) |
| M28a | 55 (98.2%) |
| H6a | 414 (98.1%) |
| D5a | 228 (97.9%) |
| D4 | 84 (97.7%) |
| D4l | 42 (97.7%) |
| L4b | 89 (96.7%) |
| H8c | 29 (96.7%) |
| A2 | 465 (96.5%) |
| D1f | 51 (96.2%) |
| L3b | 441 (95.9%) |
| D5c | 23 (95.8%) |
| A2f | 22 (95.7%) |
| H8b | 22 (95.7%) |
| W5a | 42 (95.5%) |
| D1 | 270 (94.7%) |
| D1e | 18 (94.7%) |
| D4f | 17 (94.4%) |
| A2p | 15 (93.8%) |
| A2a | 278 (93.6%) |
| L5a | 28 (93.3%) |
| A2y | 13 (92.9%) |
| M9a | 325 (92.3%) |
| A15a | 12 (92.3%) |
| A2j | 11 (91.7%) |
| A2i | 17 (89.5%) |
| M46a | 8 (88.9%) |
| A2g | 15 (88.2%) |
| A | 86 (87.8%) |
| A2r | 7 (87.5%) |
| U2e | 342 (86.6%) |
| A2d | 25 (86.2%) |
| P4b | 6 (85.7%) |
| K1d | 11 (84.6%) |
| L4a | 16 (84.2%) |
| H6c | 25 (83.3%) |
| A2q | 14 (82.4%) |
| D1a | 22 (81.5%) |
| C1 | 4 (80.0%) |
| M43a | 3 (75.0%) |
| G3a | 32 (74.4%) |
| M2 | 5 (71.4%) |
| M21a | 26 (68.4%) |
| L3c | 2 (66.7%) |
| R31b | 2 (66.7%) |
| M7c | 517 (65.0%) |
| K1 | 50 (61.7%) |
| B4j | 3 (60.0%) |
| R31a | 3 (60.0%) |
| Q1d | 7 (58.3%) |
| L6a | 4 (57.1%) |
| A2h | 15 (50.0%) |
| P3b | 9 (50.0%) |
| A2c | 4 (50.0%) |
| D2c | 2 (50.0%) |
| M37d | 1 (50.0%) |
| M40 | 1 (50.0%) |
| R7 | 1 (50.0%) |
| S | 1 (50.0%) |
| L2b | 70 (49.6%) |
| F4a | 15 (42.9%) |
| N10 | 4 (40.0%) |
| P | 18 (36.7%) |
| HV21 | 2 (33.3%) |
| C | 1 (33.3%) |
| H105 | 1 (33.3%) |
| HV14 | 1 (33.3%) |
| M37 | 1 (33.3%) |
| M81 | 1 (33.3%) |
| H20a | 12 (32.4%) |
| HV15 | 3 (30.0%) |
| M42b | 5 (27.8%) |
| P2 | 14 (26.9%) |
| M5b | 8 (26.7%) |
| HG Branch | Sequence Count |
|---|---|
| R2 | 10 (26.3%) |
| H13b | 6 (25.0%) |
| A2e | 1 (25.0%) |
| I1e | 1 (25.0%) |
| M5 | 1 (25.0%) |
| M66a | 1 (25.0%) |
| M | 15 (23.8%) |
| M17a | 5 (23.8%) |
| B2y | 4 (23.5%) |
| N | 3 (21.4%) |
| R9b | 36 (20.9%) |
| L2e | 5 (20.8%) |
| H1b | 131 (20.5%) |
| F1 | 1 (20.0%) |
| HV1c | 1 (20.0%) |
| M35 | 1 (20.0%) |
| P10 | 1 (20.0%) |
| X2d | 5 (18.5%) |
| M26 | 2 (18.2%) |
| HV0f | 3 (16.7%) |
| A10 | 1 (16.7%) |
| M12a | 12 (16.4%) |
| HV12a | 2 (15.4%) |
| L2 | 2 (15.4%) |
| H3n | 1 (14.3%) |
| M32 | 1 (14.3%) |
| R2a | 1 (14.3%) |
| T2g | 7 (14.0%) |
| T2k | 2 (13.3%) |
| C1c | 26 (12.5%) |
| B4f | 1 (12.5%) |
| H64 | 1 (12.5%) |
| N7b | 1 (12.5%) |
| X4 | 1 (12.5%) |
| U4b | 25 (11.7%) |
| C4c | 4 (11.4%) |
| M17c | 5 (11.1%) |
| Q2a | 5 (11.1%) |
| H10c | 1 (11.1%) |
| H85 | 1 (11.1%) |
| M22a | 1 (11.1%) |
| U | 1 (11.1%) |
| U5a | 135 (11.0%) |
| C1d | 23 (10.5%) |
| R1b | 2 (10.5%) |
| L3h | 8 (10.0%) |
| M65b | 1 (10.0%) |
| M30 | 7 (9.7%) |
| N21 | 3 (9.4%) |
| U1a | 16 (9.1%) |
| M42 | 2 (9.1%) |
| H40 | 1 (9.1%) |
| Y2 | 1 (9.1%) |
| U1b | 4 (8.9%) |
| U4a | 36 (8.7%) |
| U7b | 10 (8.3%) |
| H47 | 1 (8.3%) |
| H53 | 1 (8.3%) |
| B2b | 20 (8.1%) |
| M2a | 11 (8.0%) |
| H5 | 9 (8.0%) |
| L0f | 4 (8.0%) |
| R2b | 1 (7.7%) |
| U2 | 1 (7.7%) |
| R30a | 4 (7.5%) |
| F1a | 61 (7.4%) |
| Z4a | 2 (7.4%) |
| R | 9 (7.3%) |
| R5a | 4 (7.3%) |
| R0 | 1 (6.7%) |
| M5a | 11 (6.5%) |
| M52a | 2 (6.5%) |
| B2g | 1 (6.2%) |
| M10a | 4 (5.9%) |
| HV12b | 1 (5.9%) |
| M13c | 1 (5.9%) |
| R1a | 3 (5.8%) |
| M1b | 3 (5.7%) |
| M5c | 1 (5.6%) |
| Q1a | 7 (5.4%) |
| M65a | 2 (5.4%) |
| U6a | 17 (5.3%) |
| Q1 | 7 (5.3%) |
| H1m | 3 (5.3%) |
| M45a | 1 (5.3%) |
| W6 | 3 (5.2%) |
| B5a | 34 (5.1%) |
| X2a | 2 (5.1%) |
| B4h | 1 (5.0%) |
| H5d | 1 (5.0%) |
| M20 | 4 (4.9%) |
| B4c | 15 (4.8%) |
| Q1f | 1 (4.8%) |
| I2 | 6 (4.7%) |
| J1d | 5 (4.7%) |
| M62b | 1 (4.5%) |
| Q1e | 1 (4.5%) |
| B2 | 20 (4.3%) |
| R9c | 3 (4.3%) |
| V25 | 1 (4.3%) |
| H5c | 1 (4.2%) |
| U3b | 10 (4.1%) |
| H56 | 1 (3.8%) |
| B4g | 2 (3.6%) |
| H24 | 1 (3.6%) |
| M36d | 1 (3.6%) |
| U5b | 45 (3.5%) |
| H | 21 (3.5%) |
| C1b | 18 (3.5%) |
| K1a | 44 (3.4%) |
| H1c | 23 (3.4%) |
| T2d | 1 (3.4%) |
| U4c | 3 (3.3%) |
| T1a | 25 (3.2%) |
| M39b | 1 (3.2%) |
| H3a | 6 (3.1%) |
| L2c | 5 (3.1%) |
| M24b | 1 (3.1%) |
| I4a | 4 (3.0%) |
| F1c | 2 (3.0%) |
| L1b | 11 (2.9%) |
| N9a | 10 (2.9%) |
| HV | 5 (2.9%) |
| B2d | 1 (2.9%) |
| B2e | 1 (2.9%) |
| H10 | 1 (2.9%) |
| Q1c | 1 (2.9%) |
| J1c | 47 (2.8%) |
| H2a | 24 (2.8%) |
| Z1a | 3 (2.8%) |
| J2b | 10 (2.7%) |
| K1c | 7 (2.6%) |
| J1b | 12 (2.5%) |
| H2b | 1 (2.5%) |
| L3d | 11 (2.4%) |
| H4a | 8 (2.4%) |
| L2a | 27 (2.3%) |
| T2b | 25 (2.3%) |
| V | 8 (2.3%) |
| I1a | 5 (2.3%) |
| L3x | 1 (2.3%) |
| W3b | 1 (2.3%) |
| H1u | 1 (2.0%) |
| K2a | 5 (1.9%) |
| H23 | 2 (1.9%) |
| K2b | 2 (1.9%) |
| M7a | 2 (1.9%) |
| W3a | 2 (1.9%) |
| HV1b | 1 (1.9%) |
| N9b | 1 (1.9%) |
| M7b | 13 (1.8%) |
| C7a | 3 (1.8%) |
| B2c | 1 (1.8%) |
| M71 | 1 (1.8%) |
| R8a | 1 (1.8%) |
| L0a | 12 (1.7%) |
| M23 | 4 (1.7%) |
| HV2a | 1 (1.7%) |
| M35b | 1 (1.6%) |
| U8b | 1 (1.6%) |
| X2b | 4 (1.5%) |
| H5a | 7 (1.4%) |
| J2a | 6 (1.4%) |
| B6a | 1 (1.4%) |
| U7a | 4 (1.2%) |
| T2a | 3 (1.2%) |
| N1b | 2 (1.2%) |
| U3a | 2 (1.2%) |
| F1d | 1 (1.2%) |
| H1n | 1 (1.2%) |
| H3b | 1 (1.2%) |
| H3c | 1 (1.2%) |
| H7 | 1 (1.2%) |
| HV1a | 1 (1.2%) |
| L0d | 9 (1.1%) |
| W1 | 1 (1.1%) |
| H1e | 5 (1.0%) |
| B4b | 3 (1.0%) |
| T2c | 3 (1.0%) |
| M1a | 2 (1.0%) |
| N1a | 2 (1.0%) |
| M21b | 1 (1.0%) |
| M2b | 1 (1.0%) |
| M3a | 1 (1.0%) |
| H13a | 3 (0.9%) |
| H11a | 2 (0.9%) |
| U6b | 2 (0.9%) |
| H10e | 1 (0.9%) |
| B4a | 19 (0.8%) |
| M32c | 1 (0.7%) |
| H3 | 4 (0.6%) |
| B5b | 1 (0.6%) |
| H1j | 1 (0.6%) |
| K1b | 1 (0.5%) |
| C4a | 2 (0.4%) |
| C4b | 1 (0.4%) |
| L3f | 1 (0.3%) |
| L1c | 1 (0.2%) |
| H1 | 1 (0.1%) |
| H1a | 1 (0.1%) |
| L3e | 1 (0.1%) |
| Total | 10439 |