MITOMAP: Reported mtDNA Deletions

Last Edited: Nov 01, 2018

Deletion Junction (nt:nt) Deletion Size (bp) Repeat Location (nt) Repeat Type More Info
14786:14791 -4 14783-14786 D, 4/4 1
6019:6025 -5 6015-6019/6020-6024 D, 5/5 1
105:112 -6 - NR 5
8271:8281 -9 NR NR 48
9486:9502 -15 9480-9486/9495-9501 D, 7/7 1
297:348 -50 298-306/349-357 D, 9/9 2
16153:16308 -154 16165-16165/16308-16319 D, 12/12 1
3323:3588 -264 3330-3334/3597-3601 D, 5/5 1
13033:14426 -1392 13025-13033/14417-14425 D, 9/9 1
7845:9748 -1902 7838-7840/9747-9749 D, 3/3 3
12113:14422 -2308 12103-12112/14412-14421 D, 10/10 2
12102:14412 -2309 12103-12112/14412-14421 D, 10/10 4
12112:14422 -2309 12103-12112/14412-14421 D, 10/10 1
12103:14414 -2310 12103-12112/14412-14421 D, 10/10 1
10223:12604 -2380 - NR 1
10367:12829 -2461 10365-10367/12826-12828 D, 3/3 1
10598:13206 -2607 10587-10592/13192-13197 D, 6/6 1
11232:13980 -2747 11234-11242/13981-13989 D, 9/9 4
12439:15390 -2950 NR D, 6/6 1
6074:9179 -3104 6080-6083/9181-9184 D, 4/4 1
10969:14119 -3149 - NR 1
12203:15355 -3151 - NR 1
10744:14124 -3379 10745-10754/14124-14133 D, 9/10 1
8034:11423 -3388 - NR 1
9574:12972 -3397 9568-9574/12965-12971 D, 7/7 1
7491:11004 -3512 7484-7491/10996-11003 D, 8/8 2
9515:13055 -3539 9517-9525/13055-13063 D, 7/9 1
10190:13753 -3562 10191-10198/13753-13760 D, 8/8 2
1836:5447 -3610 1837-1840/5447-5451 D, 4/4 1
8371:12084 -3712 - NR 1
9191:12909 -3717 9189-9191/12906-12908 D, 3/3 1
547:4443 -3895 536-548/4430-4442 D, 13/13 7
11035:15183 -4147 - - 1
8058:12215 -4156 - NR 1
10665:14856 -4190 10666-10676/14856-14866 D, 10/11 3
10676:14868 -4191 10666-10676/14856-14866 D, 11/11 1
9485:13723 -4237 - NR 1
9483:13723 -4239 - - 1
10169:14435 -4265 10161-10165/14424-14428 D, 5/5 1
8032:12300 -4267 8032-8033/12299-12300 D, 2/2 1
8095:12393 -4297 - NR 1
11368:15786 -4417 11364-11368/15783-15787 D, 5/5 1
10941:15362 -4420 10942-10951/15362-15371 D, 10/10 1
10943:15372 -4428 10942-10951/15362-15371 D, 10/10 1
8426:12894 -4467 8416-8420/12890-12894 D, 5/5 1
7964:12432 -4467 - NR 1
9357:13865 -4507 9345-9361/13851-13868 D, 16/18 1
10058:14593 -4534 10059-10063/14593-14597 D, 5/5 2
8570:13236 -4665 8566-8571/13237-13242 I, 5/6 2
7697:12364 -4666 - NR 2
9144:13816 -4671 9137-9144/13808-13815 D, 8/8 1
470:5152 -4681 471-483/5152-5163 D, 12/13 1
7794:12561 -4766 - NR 1
10080:14959 -4878 - - 1
8631:13513 -4881 8625-8631/13506-13512 D, 7/7 1
10952:15837 -4884 10953-10961/15837-15845 D, 9/9 2
10961:15846 -4884 - NR 1
502:5443 -4939 504-512/5443-5451 D, 8/9 1
8630:13581 -4950 - NR 1
9320:14273 -4952 - - 1
8482:13446 -4963 8470-8482/13447-13459 D, 13/13 1
8468:13446 -4977 8470-8482/13447-13459 D, 13/13 3
8469:13447 -4977 8470-8482/13447-13459 D, 13/13 123
8482:13460 -4977 8470-8482/13447-13459 D, 13/13 6
8707:13723 -5015 - NR 1
10050:15076 -5025 10051-10055/15076-15080 M, 5/5 1
9180:14281 -5100 9172-9175/14289-14292 D, 4/4 1
10759:15890 -5130 NR NR 1
8421:13564 -5142 - NR 1
8562:13759 -5196 - NR 2
10370:15570 -5199 10366-10370/15568-15572 D, 5/5 1
8624:13886 -5261 8617-8624/13877-13885 D, 8/8 1
7493:12762 -5268 7491-7493/12759-12761 D, 3/3 1
10587:15913 -5325 10576-10581/15905-15910 D, 6/6 1
8312:13667 -5354 8310-8312/13664-13666 D, 3/3 1
8278:13770 -5491 8272-8277/13763-13768 D, 6/6 1
7775:13532 -5756 7769-7775/13525-13531 D, 7/7 1
8213:13991 -5777 8214-8220/13991-13997 D, 7/7 1
10154:15945 -5790 10138-10144/15944-15950 D, 5/7 3
7959:13787 -5827 7954-7959/13781-13786 D, 6/6 1
9995:15897 -5901 9998-10006/15895-15903 D, 9/9 2
7777:13794 -6016 7780-7783/13796-13799 D, 4/4 1
8563:14596 -6032 8558-8563/14588-14593 D, 6/6 1
7438:13476 -6037 7439/13476 D, 1/1 1
7841:13905 -6063 7842-7849/13905-13912 D, 6/8 4
8828:14896 -6067 8829-8838/14896-14095 D, 10/10 2
7409:13687 -6277 - NR 1
7829:14135 -6305 7824-7829/14129-14134 D, 6/6 1
8469:14805 -6335 8470-8476/14805-14811 D, 7/7 1
9238:15576 -6337 9226-9230/15568-15572 D, 5/5 1
7817:14536 -6718 - NR 1
8304:15055 -6750 8305-8312/15049-15056 D, 6/8 1
5835:12661 -6825 5836-5843/12666-12673 D, 6/8 1
8517:15421 -6903 8512-8517/15408-15412 D, 5/5 2
7501:14428 -6926 7502-7506/14428-14432 D, 5/5 1
5793:12767 -6973 5786-5792/12757-12763 D, 6/7 1
7808:14799 -6990 7809-7814/14799-14804 D, 6/6 1
8823:15855 -7031 8814-8823/15845-15854 D, 10/10 1
8623:15662 -7038 8617-8623/15656-15662 D, 7/7 1
8992:16072 -7079 - NR 3
8210:15339 -7128 - NR 2
8580:15731 -7150 8581-8587/15731-15737 D, 7/7 1
8573:15727 -7153 8574-8587/15727-15737 D, 11/14 1
6226:13456 -7229 6218-6226/13447-13455 D, 9/9 1
8412:15664 -7251 8407-8420/15658-15671 D, 12/14 1
8571:15827 -7255 8563-8571/15827/15835 D, 9/9 1
8582:15957 -7374 - NR 1
7193:14596 -7402 7169-7173/14609-14613 I, 5/5 1
8648:16085 -7436 8637-8648/16073-16084 D, 12/12 7
7989:15435 -7445 - NR 1
8637:16084 -7446 - NR 1
7543:15018 -7474 - NR 1
7974:15496 -7521 7975-7982/15496-15503 D, 8/8 3
7815:15389 -7565 7816-7823/15381-15388 D, 8/8 2
8439:16075 -7635 8433-8439/16068-16074 D, 7/7 1
6325:13989 -7663 6326-6341/13889-14004 D, 16/17 2
6330:13994 -7663 6331-6341/13994-14004 D, 11/11 2
6329:13994 -7664 6325-6340/13989-14005 D, 17/18 1
6465:14135 -7669 6466-6476/14135-14145 D, 11/11 1
6380:14096 -7715 6369-6374/14099-14104 D, 6/6 1
6075:13799 -7723 6076-6084/13799-13807 D, 9/9 1
7992:15730 -7737 7986-7992/15723-15729 D, 7/7 1
7669:15437 -7767 7662-7669/15429-15436 D, 8/8 2
7635:15440 -7804 7627-7630/15432-15435 D, 4/4 1
8213:16070 -7856 8207-8212/16071-16076 D, 6/6 1
6238:14103 -7864 6235-6238/14099-14102 D, 4/4 1
8034:16076 -8041 8030-8034/16071-16075 D, 5/5 1
8032:16075 -8042 8030-8034/16071-16075 D, 5/5 1
8030:16075 -8044 8030-8034/16071-16075 D, 5/5 1
5786:13923 -8136 - NR 1
6023:14424 -8400 6023/14423 D, 1/1 1
7449:15926 -8476 - NR 1
6601:16284 -9682 6592-3501/16274-16283 D, 10/10 1
6124:15894 -9769 3108-6017/15901-15912 D, 8/10 1
4398:14822 -10423 4389-4398/14812-12821 D, 10/10 3
3173:14161 -10987 3166-3173/14154-14161 D, 8/8 1

Note:

Most deletions above are likely somatic mutations. Other somatic variants can be found here. Only deletions with sequenced breakpoints are included. Numerous other reports of mapped deletions have been published without specific sequence data reference.

Reported deletion junctions may be approximate due to the presence identical repeat sequences at the break points. Alternate junctions may be reported in the cited literature due to the inherent ambiguities of the direct repeats.

  • D = direct repeat.
  • I = indirect repeat, homology as specified.
  • NR = no repeats reported.
  • N = number of subjects in which the deletion was detected.

References for the "common" deletion.
Topic revision: r88 - 16 Nov 2018, ShipingZhang

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