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You are here: Foswiki>MITOMAP Web>LocusND2 (15 Sep 2015, UnknownUser)
The Amino Acids of mtND2 (4470-5511)
4478 4487 4496 4505 4514 4523
5' ATT AAT CCC CTG GCC CAA CCC GTC ATC TAC TCT ACC ATC TTT GCA GGC ACA CTC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
I/M N P L A Q P V I Y S T I F A G T L
4532 4541 4550 4559 4568 4577
ATC ACA GCG CTA AGC TCG CAC TGA TTT TTT ACC TGA GTA GGC CTA GAA ATA AAC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
I T A L S S H W F F T W V G L E M N
4586 4595 4604 4613 4622 4631
ATG CTA GCT TTT ATT CCA GTT CTA ACC AAA AAA ATA AAC CCT CGT TCC ACA GAA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M L A F I P V L T K K M N P R S T E
4640 4649 4658 4667 4676 4685
GCT GCC ATC AAG TAT TTC CTC ACG CAA GCA ACC GCA TCC ATA ATC CTT CTA ATA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
A A I K Y F L T Q A T A S M I L L M
4694 4703 4712 4721 4730 4739
GCT ATC CTC TTC AAC AAT ATA CTC TCC GGA CAA TGA ACC ATA ACC AAT ACT ACC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
A I L F N N M L S G Q W T M T N T T
4748 4757 4766 4775 4784 4793
AAT CAA TAC TCA TCA TTA ATA ATC ATA ATA GCT ATA GCA ATA AAA CTA GGA ATA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
N Q Y S S L M I M M A M A M K L G M
4802 4811 4820 4829 4838 4847
GCC CCC TTT CAC TTC TGA GTC CCA GAG GTT ACC CAA GGC ACC CCT CTG ACA TCC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
A P F H F W V P E V T Q G T P L T S
4856 4865 4874 4883 4892 4901
GGC CTG CTT CTT CTC ACA TGA CAA AAA CTA GCC CCC ATC TCA ATC ATA TAC CAA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
G L L L L T W Q K L A P I S I M Y Q
4910 4919 4928 4937 4946 4955
ATC TCT CCC TCA CTA AAC GTA AGC CTT CTC CTC ACT CTC TCA ATC TTA TCC ATC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
I S P S L N V S L L L T L S I L S I
4964 4973 4982 4991 5000 5009
ATA GCA GGC AGT TGA GGT GGA TTA AAC CAA ACC CAG CTA CGC AAA ATC TTA GCA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M A G S W G G L N Q T Q L R K I L A
5018 5027 5036 5045 5054 5063
TAC TCC TCA ATT ACC CAC ATA GGA TGA ATA ATA GCA GTT CTA CCG TAC AAC CCT
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
Y S S I T H M G W M M A V L P Y N P
5072 5081 5090 5099 5108 5117
AAC ATA ACC ATT CTT AAT TTA ACT ATT TAT ATT ATC CTA ACT ACT ACC GCA TTC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
N M T I L N L T I Y I I L T T T A F
5126 5135 5144 5153 5162 5171
CTA CTA CTC AAC TTA AAC TCC AGC ACC ACG ACC CTA CTA CTA TCT CGC ACC TGA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
L L L N L N S S T T T L L L S R T W
5180 5189 5198 5207 5216 5225
AAC AAG CTA ACA TGA CTA ACA CCC TTA ATT CCA TCC ACC CTC CTC TCC CTA GGA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
N K L T W L T P L I P S T L L S L G
5234 5243 5252 5261 5270 5279
GGC CTG CCC CCG CTA ACC GGC TTT TTG CCC AAA TGG GCC ATT ATC GAA GAA TTC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
G L P P L T G F L P K W A I I E E F
5288 5297 5306 5315 5324 5333
ACA AAA AAC AAT AGC CTC ATC ATC CCC ACC ATC ATA GCC ACC ATC ACC CTC CTT
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
T K N N S L I I P T I M A T I T L L
5342 5351 5360 5369 5378 5387
AAC CTC TAC TTC TAC CTA CGC CTA ATC TAC TCC ACC TCA ATC ACA CTA CTC CCC
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
N L Y F Y L R L I Y S T S I T L L P
5396 5405 5414 5423 5432 5441
ATA TCT AAC AAC GTA AAA ATA AAA TGA CAG TTT GAA CAT ACA AAA CCC ACC CCA
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
M S N N V K M K W Q F E H T K P T P
5450 5459 5468 5477 5486 5495
TTC CTC CCC ACA CTC ATC GCC CTT ACC ACG CTA CTC CTA CCT ATC TCC CCT TTT
--- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
F L P T L I A L T T L L L P I S P F
5504
ATA CTA ATA ATC TTA T 3'
--- --- --- --- --- -
M L M I L
Nucleotide 4985A represents a corrected Cambridge sequence error per Andrews etal (1999).
* AUU normally codes for isoleucine during elongation but in ND2 codes for methionine for initiation see codon usage notes.
Amino Acid Distribution in human mtND2
|
ND2 (4470-5511) AA |
# |
% |
|
Ala (A) |
20 |
5.8% |
|
Arg (R) |
4 |
1.2% |
|
Asn (N) |
20 |
5.8% |
|
Asp (D) |
0 |
0.0% |
|
Cys (C) |
0 |
0.0% |
|
Gln (Q) |
10 |
2.9% |
|
Glu (E) |
6 |
1.7% |
|
Gly (G) |
13 |
3.7% |
|
His (H) |
4 |
1.2% |
|
Ile (I) |
31 |
8.9% |
|
End (*) |
0 |
0.0% |
|
Leu1 (L)(UUA/G) |
9 |
2.6% |
|
Leu2 (L)(CUN) |
55 |
15.9% |
|
Lys (K) |
12 |
3.5% |
|
Met (M) |
25 |
7.2% |
|
phe (F) |
15 |
4.3% |
|
pro (p) |
23 |
6.6% |
|
Ser1 (S)(UCN) |
23 |
6.6% |
|
Ser2 (S)(AGU/C) |
5 |
1.4% |
|
Thr (T) |
43 |
12.4% |
|
Trp (W) |
11 |
3.2% |
|
Tyr (Y) |
10 |
2.9% |
|
Val (V) |
8 |
2.3% |
|
ND2 Total AA |
347 |
100.0% |
|
Acidic (Asp + Glu) |
6 |
1.7% |
|
basic (Arg + Lys) |
16 |
4.6% |
|
Aromatic (phe + Trp + Tyr) |
36 |
10.4% |
|
Hydrophobic (Aromatic + Ile + Leu + Met + Val) |
164 |
47.3% |
|
Molecular Wt |
38948 |
|
|
Average pI |
6.14 |
Amino acid detail: ATP6, ATP8, ND1, ND2, ND3, ND4, ND4L, ND5, ND6, CO1, CO2, CO3, CytB. Go to the Human Mitochondrial Genetic Code.
Topic revision: r1 - 15 Sep 2015, UnknownUser
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