Mitochondrial DNA-like sequences in the nucleus (NUMTs)

Nuclear mitochondrial DNA sequences (NUMTs) are common in eukaryotes. Human mtDNA sequences are listed below by their location in the human nuclear genome. Celera Scaffold and GenBank accession numbers are indicated for each NUMT-containing contig. Date of last update: September 29, 2006, except where noted.

Chromosome Location	Celera Scaffold and GenBank accession numbers	% rCRS similarity	mtDNA Location (rCRS: NC_012920)
1p36.3	GA_x5J8B7P0VAE:1..500000 GenBank: AL663100.12	82 81	1123-910 1117-910
1p36.3	GA_x5J8B7P0VAE:4000001..4500000 GenBank: AL356693.37	90 90	2466-2675 2675-2466
1p36.3	GA_x5J8B7P0VAE:1000001..1500000 GenBank: AL139415.10	89 89	8040-8202 8040-8202
1p34.3	GA_x5L2HTVAVSK:8500001..9000000 GenBank: AL513220.9	100 100	8934-9007 8934-9007
1p32	GA_x54KRE9971S:1..3319 AL645730.10	78 78	4666-5022 4608-5022
1p31	GA_x5HB7VCJ5FA:3500001..4000000 GenBank: AC096951.2	89 88	16567-16401 16567-16401
1p13	GenBank: AL627169.8	74	5855-9316
1p22	GenBank: AL117351.12	69 75 71 75 67 70 72 78 72 . 66 68 75 75 77 65 80 88 70 69 67	1721-3106 5566-5892 6841-7680 7863-8246 8688-9191 9921-10579 12032-12340 12586-12653 12639-12875 Other Species: 4572-5438 (NC_001601.1 blue whale mtDNA) 5767-5990 (NC_001601.1 blue whale mtDNA) 7065-7226 (CO2)(NC_001779.1 rhinoceros mtDNA) 4530-4620 (NC_001950 spotted catshark mtDNA) 7753-7826 (NC_001779.1 rhinoceros mtDNA) 7768-7861 (NC_001665.1 rat mtDNA) 7924-8071 (NC_001779.1 rhinoceros mtDNA) 8579-8620 (NC_002009.1 fruit eating bat mtDNA) 8697-8875 (NC_001821.1 armadillo mtDNA) 10915-11904 (NC_001601.1 blue whale mtDNA) 12665-12897 (NC_001602.1 gray seal mtDNA)
1p11	AC022192.3	82 80 74 73	987-1534 15042-15087 5604-6979 9394-10319
1q12	GA_x54KRE8AV33:1..500000 GenBank: AC068398.3	88 74 74 83	6870-6981 9386-10319 5596-6979 987-1526
1q24	GA_x54KRE8EL5L:6500001..7000000 GenBank: AL160059.7	76 77	12143-12536 12143-12536
1q43	GA_x5J8B7NYNCY:4000001..4500000 GenBank: AL590396.13	81 78 70 72	12562-6189 573-6196 12-244 12156-16563
1q43	GA_x5J8B7NYNCY:6500001..7000000 GenBank: AL451068.13	74 71 71 74	9771-14799 14796-15722 14796-15722 9771-14799
2p22	GA_x5L2HTTHY8E:16000001..16500000 GenBank: AC007317	88 88	1124-956 1124-966
2p16	GA_x5L2HTTHY8E:6500001..7000000 GenBank: AC009234	83	6998-6270 6998-6270
2p12	GA_x54KRE9UVK8:5500001..6000000 GenBank: AC007400	90 90	2998-3103 3103-2998
2p11.2	GA_x54KRE9UVK8:12000001..12500000 GenBank: AC013262.7	87 87	8103-7862 8110-7862
2p11.1 to centromere	GA_x54KRE9YMAP:1..500000 GenBank: AC097374.3	84 74 77 84 85 74 77 . 92 86	987-1511 5624-6973 9394-10138 987-1511 15042-15087 5624-6973 9394-10138 Other Species: 9586-9513(ND3) (NC_002080.1 hedgehog mtDNA 9640-9747(ND3) (NC_001646 orangutan mtDNA)
2p11.1 (Celera) 2p11.2 (GenBank)	GA_x54KRE9UVK8:13000001..13500000 GenBank: AC098817.3	71 92 85 71 73 85 . 87 92 64	11593-16569 336-404 577-710 11592-16567 334-402 575-708 Other Species: 15964-16011(NC_000934.1 elephant_mtDNA ) 15303-15361 (tRNAThr)(NC_001992.1 baboon mtDNA 564-798(Dloop)(AF311721 gibbon mtDNA)
2q13	AC021029.5	74 73 85	9394-10319 5612-6976 987-1511
2q13	GA_x5J8B7P878N:12500001..13000000 GenBank: NT_005445.2	81 83 85 71	596-6431 16434-16563 16444-60 16434-6431
2q14.1	GA_x5J8B7P878N:9000001..9500000 GenBank: NT_025657.1	76 74 74 74 75 78 74 74 74 75	13247-13907 12744-13215 11276-12755 9785-11318 8513-9755 8513-9692 9726-9796 9785-11318 11550-12676 12751-13209 13247-13907
2q14.1	AC092107.5	84 75 78	987-1511 5613-6976 9394-10138
2q14.2	GA_x5J8B7P878N:3500001..4000000 GenBank: AC097499.3	79 93 81 74 79 93 78	575-998 206-235 11-76 16295-16563 16402-16563 206-235 577-998
2q21	GA_x5L2HTVCF7A:1..849 GA_x5HB7VCBQU9:1..1119GenBank: AC068137.8	75 83 75 72 76 75	10005-10859 11400-12340 3799-15398 3646-3781 15391-15534 3658-3762
2q21	AC023928.3	78 73 76 88 73 84	5555-6145 5171-5550 575-5176 212-245 16304-16562 11-60
2q21	AC073869.5	74 73 78 75 77 78	10657-15398 10612-10515 6534-6461 6380-10519 3658-6262 15391-15534
2q22	GA_x5L2HTTEENY:37500001..38000000 GenBank:AC013437.8	71 73 80 76 76 80 67 73 71	7754-9764 9841-16565 577-2173 2181-2393 2179-2391 575-2171 11-258 9840-16563 7753-9763
2q22	AC018856.4	75 73 84 71 73 71 77 88 79 81	10310-9840 9755-8554 8383-8295 8185-7753 10380-15933 15593-16122 16295-16563 11-60 575-2139 2179-2319
2q22	AC092156.2	76 76 88 84 73	5171-6145 575-5176 212-245 11-60 16304-16562
2q23.3	AC016147.12 AC068744.2	77 75 84 86	9394-10138 5613-6976 987-1394 4145-4223
2q23	GA_x5L2HTTEENY:33000001..33500000 GenBank: AC069333.8	90 92	2771-2856 2769-2848
2q23	GA_x5L2HTTEENY:31500001..32000000 GenBank: AC105402.5 AC016763.8	98 74 98 73	611-742 16444-16563 611-742 16444-16563
2q23	AC092662.2	81 73	4848-6196 11801-15087
2q32	GA_x5L2HTTEENY:1000001..1500000 GenBank: AC062033.2	80 80	823-1270833-1264
2q34	GA_x54KRE9S8TU:6500001..7000000 GenBank: AC007282.4 and in AC007283.3	75 75 69 68 67 . 69	10412-13131 10412-13131 12427-13617 11705-12323 9495-11610 7241-9066 Other Species: 9743-9441 (NC_001602.1 whale mtDNA
2q34	GA_x54KRE9S8TU:8000001..8500000 GenBank: NT_005229.2	74 78 75 77 77	6944-11067 11082-11341 10897-10790 15585-15497 6424-5769
2q37	GA_x54KRE9T42T:17500001..18000000 GenBank: AC108203.5 AC010735.11	81 91 81 91	2648-2742 890-1048 2648-2742 890-1048
2q37	GA_x54KRE9U2AY:8000001..8500000 GenBank: AC012305.7	81	777-1032
2q37	GA_x54KRE9U2AY:10000001..10500000 GenBank: AC112721.3	79 86 89 95 92 92 91 91 86 84 82 84 74 89 91 92 91 92 92 92 91 92 89 92 92 89 73 74	13246-13587 13048-13130NN 13048-13103 13059-13103 13048-13103 13049-13103 13048-13103 13048-13103 12989-13103 12568-12683 12143-12333 11913-11982NN 13048-14229 13048-13103 13048-13103 13048-13103 13048-13103 13048-13103 13048-13103 13048-13103 13048-13103 13048-13103 13048-13103 13048-13103 13048-13103 13049-13103 11797-13103 10087-10319
3p21	AC027471.3	75 79	10152-10319 9485-9991
3p21	GA_x54KREA3PFF:2500001..3000000 GenBank: AC092796.2	79 79	10428-10598 10394-10643
3p11	GA_x54KREACQDQ:2500001..3000000 GenBank: AC104435.2	82	9137-9366
3p11	GA_x54KREACQDQ:6500001..7000000 GenBank: AC096922.2	100 84 96 81 83 96 81 100	12612-12640 3058-3217 →contiguous to next → 4354-4429 16086-16124 3058-3216 4354-4429 16086-16146 12612-12640 (→, contiguous fragments)
3q11.1	GA_x54KREA92UK:500001..1000000 GenBank: NT_022497.2	72	6027-9316
3q11.1	GA_x54KREA9LET:2500001..3000000 GenBank: AC024033.4 AC106717.2	97 84 94 84	(NNN)2583-2718 6535-6679 1396-2718 6535-6683
3q12	GA_x5HB7VCG0V5:18500001..19000000	73 74 78 70 75 74 78	10660-12340 8620-10582 576-858 12464-14370 5975-6204 3601-4816 1020-2048
3q13.3	GA_x5HB7VCG0V5:4500001..5000000 GenBank: AC117472.3	81	7161-7773
3q25	GA_x5L2HTULD24:26500001..27000000 GenBank: AC016920.14	90 83 85	1927-2141 2007-2316 1925-2314
3q26.1	GA_x5L2HTULD24:32000001..32500000 GenBank: AC104629.10	70 74 78 69 72 73	11971-12245 9110-10897 1972-2067 1544-1968 1362-1503 612-1375
3q26.3	GA_x5L2HTULD24:37500001..38000000 GenBank: AC008134.3	86	6708-6931
4p16.2	AL137218.3; AL354697.5	78 78 74 85	9450-10138 9394-10138 5641-5976 987-1511
4p16	GA_x54KREAGLJJ:4500001..5000000 GenBank: AC093846.3	78	4613-5233
4p15.3	GA_x54KREAGLJJ:7000001..7500000 Genbank: AC110758.3	82	13098-13388
4p15.2	AC092436.5	73 73 72 73	11303-12301 9446-11290 11288-12301 9440-11293
4p15.2	GA_x54KREAGLJJ:17500001..18000000 GenBank: AC093854.2	94	2899-3050
4p11	GA_x5J8B7PYEPE:4000001..4500000 GenBank: AC104646.5	96	14981-15073
4q11	GA_x5HB7VD3DQW:4000001..4500000 GenBank: AC097648.2 (4q12-4q13 border)	78 77 79 79 67 77 78	9466-10836 13029-16238NNN 9169-9410 9169-9410 110-426 13029-16569 9466-10836
4q13	GA_x5HB7VD3DJW:8500001..9000000 GenBank: AC114801.4; AC093897.3	77 79 91 84	2090-2472 15116-15197 2225-2456 15116-15174
4q21	GA_x54KREAHVLE:6000001..6500000 GenBank: AF163864	83	2856-3075
4q21	GA_x54KREAHVLE:9000001..9500000 GenBank: AC022317.8	80	2790-3590
4q26	GA_x54KREAHVSH:2000001..2500000 GenBank: NT_031781.1 (and in NT_022790.2)	78 64 68 76 79 78	575-3161 357-456 11-239 16498-16562 16414-16562 575-3161
4q28	GA_x54KREAK5QS:8500001..9000000 GenBank: AC108045.3	85	2008-2388
4q31.3	GA_x5HB7VCDYHN:9500001..10000000 GenBank: AC097526.3	75 77	664-15579 664-15555
4q34	GA_x5HB7VCDYHN:2500001..3000000 GenBank: AC114770.4	93	12250-12417
4q35	GA_x5L2HTUQ8NL:5000001..5500000 GenBank: AC018710.4	84	7625-7773
5p15.3	GA_x5J8B7Q24ES:1500001..2000000 GenBank: AC091967.3	79 79 78 79	6957-7908 6597-7111 6957-7956 6957-7111
5p15.3	GA_x5J8B7Q2FPT:5500001..6000000 GenBank: AC034217.6; AC002087.1	71 70 81 87 87 81 70 71	14164-16569 11-259 596-1087 15978-16024 15978-16024 596-1087 11-259 14164-16569
5p13	GA_x54KREAPDRV:1..929 GenBank: AC021965.3	82 87	6117-6408 6117-15183
5p13	GA_x54KREAR86K:500001..1000000 GenBank: AC109579.1	82	3822-4308
5q13	GA_x5J8B7Q1L5Q:11500001..12000000 GenBank: AC022223.18	93	None in Celera 341-2697
5q14/15	GA_x54KREANY7M:1..500000 GenBank: NT_023290.4	78 76 78	5934-7908 7908-7543 5934-7908
5q14	GA_x54KREANQ9F:2000001..2500000 None in GenBank.	90	12662-12782
5q14.3	GA_x54KREAQK1W:1..551 And:GA_x54KREANNNA:1..551 GenBank: AC013344.4;AC018806.4; AC093311.2	84 84 84 86 86 . 88	15576-16041 15576-16041 8413-8484 12662-16124 12662-16124 Other Species: 7970-8003 (NC_001794.1 wallaroo mtDNA)
5q21	AC112203.2	67 71	13799-14336 14330-16033
5q21	GA_x5J8B7Q1NA9:1..500000 GenBank: AC114285.2	90 90	14658-14829 14658-14829
5q23	GA_x54KREAQM8V:1500001..2000000 GenBank: AC008565	79	383-708
5q31	GA_x54KREAQM8V:4500001..5000000 GenBank: AC026409.4	82 84	128-251 574-1537
5q32	GA_x5HB7VCVS5L:1500001..2000000 Maybe GenBank: AC008670.6	90 93	15186-15487 10269-15487
6p25	AL451141.13; HarborsAF035429.1 and AF134583.1/AL359496.30	76 98 98 98	8692-8495 5804-8384 3914-9755 3914-9755
6p21.2	GA_x54KREAYBCL:23000001..23392619 GenBank: AL731683.11	78	9096-9888
6q16	GA_x54KREB0N5G:3000001..3500000 GenBank: AL078595.12	83 71	4150-4487 15478-15811
6q16	GA_x54KREB0N5G:5500001..6000000 GenBank: AL132766.13	81 85 88 85	6532-6745→ 10622-10474→ 5521-5622→ 8774-8437 (→, contiguous fragments)
6q23	GA_x5L2HTU8439:15500001..16000000 GenBank: AL356774.13 AL137783.12	83 77 83 77	15395-15628 15167-15283 15395-15627 15167-15283
6q25	GA_x54KREAVE16:6500001..7000000 GenBank: AL603908.3	81	7451-11649
6q26	GA_x54KREAVE16:3500001..4000000 GenBank: AL158033.18	85	3163-3380
7p14	GA_x5HB7VCTE59:1..151713 Also partly in GenBank:M11577	74	10657-15398
7p14)	GA_x5HB7VC7SEG:500001..1000000 GenBank: AC069285.8;AC115220.1	83 75 76 86 90 76 75 83	3117-3191 3430-8634 8662-11973 8758-8823 15673-15713 8662-11973 3430-8634 3117-3191
7p14	GA_x5L2HTTW8W2:1..4474 GenBank: AC099654.5 (NUMT in intron of XM_094983.1)	74 74 69 88 74 86	9395-13830 8316-15614 15755-16569 11-60 3819-16563 11-60
7p12	GA_x5HB7VCL761:1..500000 GenBank: AC004844.1	91	2418-2574
7q11.1	GA_x5L2HTUEKN6:500001..1000000 GenBank: AC006013 AC093655.4 *The fragment 5385-5415 is not found in GenBank	83 77 75 78 90 77 83 78 74	7175-7312 7303-7537 11122-11408 11307-11527 *5385-5415 7303-7537 7175-7312 11307-11526 11122-11407
7q11.1	GA_x5L2HTUEKN6:2000001..2500000 GenBank: AC092100.5	70 72 78 74 74	8510-8741 7515-8396 6594-7531 5513-6553 5239-5525
7q31.2	GA_x54KREB2RL0:16000001..16500000 GenBank: AC004112.2	73	13065-16031
7q32	AC004979.1; AC006362.2 (NUMT in intron of XM_069781)	75 82 81	3292-6623 2740-3300 12562-12731
7q34	GA_x54KREB2R4M:1..1991 GenBank: AC119751.3	78 81 79 76	9471-10138 10149-10234 9485-10138 10149-10319
7q36	GA_x54KREB3J6B:1..500000 GenBank: NT_007772.1	82 75	2740-3300 3292-6623
7q36	GA_x54KREB449V:1500001..2000000 GenBank: NT_007914.8|Hs7_8071	98	1613-1708
7q36	GA_x54KREB44CJ:500001..1000000 GenBank: U66061 NT_023640.7	70 83 71 83	11-243 576-3098 11-243 574-3096
8q12	AC022861.4	73 73 71 86 88 . 74	8510-9827 11220-14157 13552-16569 11-60 334-367 Other species 10659-13559 (NC_000845.1 pig mtDNA)
8p11.2	AL355484.10	75 78	13931-14460 14675-16024
8p11.2	GA_x5L2HTU51L1:20000001..20500000 GenBank: NT_007995.8	77 70 75 87	16469-16571 11-5077 5091-5721 12258-12341
8p11.1	GA_x5L2HTU51L1:23500001..24000000 GenBank: AC124073.9	77	13931-16024
8p21	GA_x5L2HTU51L1:7500001..8000000 GenBank: AC022559.12	84	8666-8876
8p22	GA_x5L2HTU51L1:6000001..6500000 GenBank: AC087821.5	79	14793-15243
8p23	GA_x54KRE87YE8:1..347845 GA_x54KREB9DLL:1..184161 May be GenBank: NT_008292.9	87 87 88	782-637 782-637 782-637
8q11.1	GA_x5L2HTV532K:500001..1000000 GenBank: NT_023678.7|Hs8_23834	75 78 77 71	4247-5134 568-3480 576-684 → contiguous to next →14346-239 (→, contiguous fragments)
8q12	GA_x5L2HTV532K:21500001..22000000 GenBank: AC022861.4	73 74 71	8510-9827 10659-13559 13553-367
8q13	GA_x5L2HTV532K:30500001..31000000 GenBank: NT_008055.8|Hs8_8212	86 83 86	1524-1734 8422-8459 1524-1734
8q13	GA_x5L2HTV532K:30000001..30500000 GenBank: NT_008055.8|Hs8_8212	81	2288-2663
8q13	GA_x5L2HTV532K:26500001..27000000 GenBank: AC022893.6	86	625-782
8q22	GA_x5HB7VCY1B9:13500001..14000000 GenBank: AC026827.6	98	14861-14944
8q23 8q22	GA_x5HB7VCY1B9:17000001..17500000 GenBank: NT_008136.2	71 69 69 81 75 70 71	16457-16565 583-2342 2467-4370 4366-4481 5517-5960 6095-7325 7449-7736
8q23	GA_x5L2HTU3MBV:1..500000 GenBank: AP002980.2	82 78	15008-15225 16414-16563
8q24.3	GA_x54KREBBWRK:11500001..12000000 GenBank: AC090821.13	83 76	5511-6214 4859-6678
9p24	GA_x5L2HTUGAQ2:24500001..25000000 GenBank: NT_008413.8|Hs9_8570	69 76 73 74 88	13724-14701 1288-7947 7972-9891 9882-13588 15281-15315
9p24.3	AL591968.4; AL512605.13	100 79	6225-6420 3757-3891
9p12	GA_x5L2HTTPM0J:1..500000 [And GA_x54KRE8WC29:1..123045 and GA_x5L2HTUTQDW:1.191478 and GA_x5HB7VD8UY6:4500001..4887684 and GA_x5HB7VD8UY6:3000001..3500000] GenBank: AL355377.25; AL356489.14; AL139113.21	71 83 77 71 84 73	11-235 574-3096 16193-16479 11-235 574-3096 15515-15774
9q21	GA_x5L2HTVCTL9:3000001..3500000 GenBank: AL390788.15	76 77	7506-7573 7505-7572
9q21	GA_x5L2HTVCTL9:5000001..5500000 GenBank: AL160267.17(NUMT in intron of XM_095995.3); AL592047.10	76 81 73 76 76 81 73 90 80	4397-6215 583-1010 16306-60 4613-6990 4396-6214 581-1008 16304-16569 11-60 3811-3920
9q21	GA_x5L2HTVCTL9:5500001..6000000 May correspond in GenBank to: AL160278.24	74 75	13856-14352 13856-14352
9q22	GA_x5L2HTTPLFK:2500001..3000000 GenBank: AL157827.17; AL354751.7 {mtDNA insertion comprises most of the 2nd intron of the gene XM_011798.1}	79 79 76 73	5443-6016 [contains a (G)nt/a X 5 insert] 5443-6016 9109-9888 9880-11699
10p15	GA_x54KRE8JUR1:2000001..2500000 GenBank: AL354747.12	80	13002-13184
10p13	AL353147.10	78 76 74	2305-2844 3226-3515 4179-5306
10p12	GA_x5L2HTTFEJ9:6000001..6500000 GenBank: AL139404.9	88	2515-2659
10p12	GA_x5L2HTTFEJ9:13000001..13500000 GenBank: AL353147.10	74 76 78	4179-5306 3226-3515 2305-2844
10p11.1	GA_x54KRE8L8BD:1..500000 GenBank: AC018684.3; AL121927.24	77 80 77 82	1721-3875 1345-1459 1721-3875 12818-13577
10p11.1	GA_x54KRE8L8DP:3500001..4000000 GenBank: AL590730.6	75 74	NNN12074-13949 11669-13949
10q11.1	GA_x39G1FFS6TE:1..1218 GenBank: AC024235.3	80 79	9485-10125 9485-10138
10q23	GA_x5J8B7Q1L3K:1..133998 GenBank: AF227907.1	81 85 80 82 85	4064-11117 14328-14580 14360-16569 1-11116 14327-14582
10q22	GA_x5L2HTUSATD:2500001..3000000 GenBank: NT_025827.1	75 70 72	3294-4489 4624-5373 5512-9035
10q25	GA_x5HB7VCTE6R:12500001..13000000 GenBank: AL441886.18	84	8295-8809
10q26 or10q11.23	GA_x5L2HTVF5SB:1..25969 and GA_x5L2HTVEPJC:1..2306 GenBank: AC074322.4	74 84 78 76 78 84 76 80	1450-2482 11-60 575-1281 11-245 577-1283 11-60 575-2817 2801-3165
11	AC000382.1	83 74 78	987-1511 5613-6976 9386-10138
11p15	GA_x5L2HTTV9VQ:5000001..5500000 GenBank:AC021914.7	94 90 93	523-728-NNN 2828-2974 521-2972
11p12	GA_x5L2HTTV9VQ:34500001..35000000 GenBank: AC027806.8	77	6919-7745
11p11.1	GA_x54KRE8RWR0:1000001..1500000 GenBank: AC018410.24	86	13225-13452
11q13	GA_x54KRE8TKVU:1500001..2000000 GenBank: AP001104.4;AP000763.4; AP002789.3; AP000676.5	92 76 92 84 82 66 74	6642-6804 15892-16031 6642-6804 10822-10897 596-1163 15864-16475 14414-15867
11q13	GA_x54KRE8TL24:4000001..4500000 GenBank: AP002783.3	73 73	9820-15567 9820-15567
11q22	GA_x54KRE8WCAA:13500001..14000000 GenBank: AP003461.2	75 75	575-9745 575-9745
11q23	GA_x54KRE8WCAA:6000001..6500000 GenBank: NT_009151.8|Hs11_9308	89 86	15475-15611 15453-15612
11q25	GA_x54KRE8WCJ9:3500001..4000000 GenBank: AP003040.2 AP000926.5	94 72 94 72	14660-14741 15391-15833 14660-14741 15391-15833
12	AC078877.9	76 74	10149-10319 10031-10138
12p12	GA_x54KRE902N0:15000001..15500000 GenBank: AC092862.12	90	1722-1826
12q11	GA_x54KRE91FD8:8500001..9000000 GenBank: AC018698 AC073607.19	73 100 73 98	3605-5069 3791-3879 3605-5069 3791-3879
12q12	GA_x54KRE91FD8:1..500000 GenBank: AC131157.4	84	4251-4423
12q24.3	GA_x5L2HTV8TDQ:1500001..2000000 GenBank: NT_009482.8|Hs12_9639	84	12142-12344
13q12	GA_x5HB7VCN3FD:16000001..16500000 GenBank: AL157694.7	85	4210-4415
13q14	GA_x5HB7VCN3DA:7000001..7500000 GenBank: AC006442.1 ; AL353657.26	90 89 68 . 71	2898-3071 2898-3071 8002-8369 Other Species: 7250-7446 (NC_001941.1 sheep mtDNA)
13q14	GA_x5HB7VCN3DA:7500001..8000000 GenBank: AL138997.18	91 91	5108-5230 5108-5230
13q21	GA_x5L2HTU7TGA:1..2170 GenBank: AC024975.2	84 84 75 77 78 76	1019-1507 1507-1019 6976-6080 5980-5613 9394-10126 10163-10302
13q21	GA_x5HB7VCN3DA:9500001..10000000 GenBank: AL390722.10	81 81	13012-13177 13012-13177
13q21	GA_x5HB7VCN3QP:10500001..11000000 GenBank: AL137244.28	85 84	9874-10039 9874-10039
13q31	AL445195.4	70 70 70 70	11042-12783 12787-14300 12787-14300 11042-12783
13q32	GA_x54KRE96ECP:9000001..9500000 GenBank: AL138955.14	78 71 78 71	13051-13337 13327-60 13051-13337 13327-16560
13q34	GA_x54KRE96ECP:23000001..23500000 GenBank: AL138816.12; AL160158.10; AL160031.9	99 99	1115-1237 982-1237
14q11.1	AJ238393.1	87	2011-2079
14q22	GA_x5L2HTU0SRS:53000001..53500000 GenBank: AL122125.4	83	574-920
14q31	AC021835.3	76 69 74 75 79	14922-15411 14333-14715 12427-14298 11352-12333 1796-3314
14q32	GA_x5L2HTU0SRS:21000001..21500000 GenBank: AL355887.4	77 77	577-2364 575-2350
15q13	GA_x5L2HTUCKNG:5500001..6000000 GenBank: AC025429.6	75	11687-13134
15q15	GA_x5L2HTUCKTJ:2500001..3000000 GenBank: AC022467.7 and AC091074.3	80 76 80	12980-13184 13205-13292 12980-13184
15q21	GA_x5L2HTUCKTJ:14000001..14500000 GenBank: AC025916.5 andAC066616.6	73 75 73 87 85 86 73 75 73	9615-11019 11231-12237 12465-16016 11366-11418 5297-5334 11366-11418 9614-11019 11231-12237 12465-16016
16p13.3	GA_x5L2HTVF6CQ:8000001..8500000 GenBank: NT_010530.8|Hs16_10687	74 75 74	8514-13708 14492-16030 8514-16030
16p13.3	GA_x5L2HTVF6CQ:500001..1000000 GenBank: NT_010577.2	76 76 78 83 77 77 85 82 86	5856-7684 2828-4596 2197-2819 2112-2211 7683-5856 4615-2895 2817-2427 2209-2110 2685-2427
16p13.3	AC024953	100 84	1272-1342 3011-3069
16p13.1	GA_x5L2HTV7HJN:500001..742907 GenBank: NT_031896.1|Hs16_32067	75	12221-13575
16p12	AC007595.7	74 75 . 71	8513-13707 14491-16029 Other Species: 15508-15618 (NC_001992.1 baboon mtDNA)
16p11.1	GA_x54KRE99UHB:500001..1000000 GenBank: AC026474.6	80	12197-12370
16q22 16q23	GA_x54KRE9B9GJ:5500001..6000000 GenBank: AC009140.6	79 86 72	14435-16562 11-60 13930-16562
17	AC091085.2	79 74 83	9386-10138 5613-6976 987-1511
17p11.2	GA_x5HB7VCTDR9:1..17488 GA_x9V1A74:1..1215 [and GA_x5L2HTVDBJD:1..932; GA_x5J8B7Q1AL2:1..932; GA_x5HB7VCSLWB:1..932, 99% sim to Hs17_25018] GenBank: NT_024862.13; AC107940.13	85 74 78 83 85 81 85 83 80 87 83 87	14360-15163 16019-480 16304-480 16376-447 16376-447 6518-11116 14327-14582 14360-14528 14365-458 573-1560: 1592-11112: 14582-14327
17p11.2	GA_x54KRE9GCSG:500001..1000000 GenBank: AC025627.13 (% sim updated 1/5/17)	77 78 78 81 73 75 75 81 81 80 82 78 75 77	6392-4942 4887-4626 4595-3261 2340-2084 2097-11 11797-11897 16296-16569 16402-16563 575-2097 2084-2665 2656-3274 3261-4613 4605-4887 4936-6392
17p11.2	AC005722.1	82	11834-11897
17p11.2	AC003957.1	79 86	8716-8846 8795-8846
17q11.2	GA_x9V1AYL:1..500000 also in: GA_x5L2HTTED7M:1..456335 GenBank: AC004134	79 79 89	2265-2601 2267-2603 2418-2594
17q21	GA_x9V1AR7:500001..1000000 GenBank: AC023855.15	97	10143-10210
17q21	GA_x9V1B0T:6500001..70000 00 GenBank: AC073480; AC025505.11	97 96 82	6818-6909 6818-7470 12265-12339
18p11.3	GA_x5HB7VCPGRD:2500001..3000000 GenBank: AP000919.6	90 93	14381-14536 14536-14381
18q12	GA_x54KRE9MHP4:500001..1000000 GenBank: AP001386.3	96 97	7975-8166 7975-8166
18q21	GA_x54KRE9MHP4:14500001..15000000 GenBank: AC105183.8	83 83	963-1281 963-1281
19p13.2	AC008758.7;AC012618.7; AC022415.5	80 84 71 73 81 73 76 73 . 87 80 77 72	5343-5427 6888-6937 7971-8221 8791-9277 4303-4243 3903-3660 4480-4215 2748-2536 Other Species: 7243-7414 (NC_001821.1 armadillo mtDNA) 3535-3653 (NC_002080.1 hedgehog mtDNA) 4285-4389 (NC_001779.1 rhinocerus mtDNA) 2703-2899 (NC_000884.1 guinea pig mtDNA)
19q13.4	GA_x54KRE9RQ87:1500001..2000000 GenBank: AC044792.6	83 75	12143-12337 11917-12337
20q13.3	GA_x5L2HTTW9JV:5000001..5500000 GenBank: AL109955.38 AL117380.28	83 77 90 78 79 88 92	11-60 573-4281 12962-13038 2682-987 945-573 60-11 12962-13031
21	AC027762.2	78 76	9470-10128 10163-10302
21q22	GA_x5J8B7P9YMR:3500001..4000000 GenBank: AL163302.2	87 88	5995-6188 6188-5995
22q13	GA_x39G1F6QCNE:1..500000 GenBank: AL022327.17	80 79	667-898 692-898
Xp22.3	GenBank: AC119041.6	76	14074-16005
Xp22.3	GA_x5J8B7PLWN9:1000001..1500000 GenBank: AC112497.4	83 83	6679-6501 6691-6501
Xp22.33	AC021859.4	75 86	14074-16005 15990-16030
Xp11.2	AL020991.1	87	2707-2613
Xp11.2	GA_x5J8B7PE4U0:1..500000 GenBank: Z83821.1; AL158819.14; AL590240.5	80 88 87 78 77	576-6407 2615-2701 2707-2613 5661-576 6406-5576
Xp11.2-Xq21	NT_011669.16	73 76 83 72 80 76 74 74 77 80 73 74 76 78	813-1506 1893-2119 2445-2699 2801-3979 4381-4481 4567-4687 15713-15575 15336-14775 14633-14415 13589-13477 13400-12750 12644-12523 12339-11947 11766-11656
Xq25	AL391375.11	85 80 75	703-575 16569-16402 16009-14685
Xq26.1	GA_x39G1FU7W5T:1..260539 GenBank: AL359973.11;	70 87 93 96 93	14685-245-(CACG)12 574-703 6553-7302 953-687 10606-11159
Xq21-Xq28	GenBank: NT_011786.15	93 96 93 75 80 85 80 74 81 74 75 95	6553-7302 953-687 10606-11159 14685-16009 16402-16569 575-703 11471-11543 683-2216 2418-2699 2907-3749 3925-4423 11119-11075
Yp11.3	GA_x5L2HTV86JQ:1..970 AC010905.3	100 100	1272-1342 1342-1272
Yp11.2	AC025731.12	74 80 77 74 84	14422-15348 16501-16562 596-1172 1166-3458 4265-4477
Yp11.2	GA_x5L2HTTS0UA:1..1112 and GA_x54KREA67C8:1..810 GenBank: AC009952.4	100 100 100	6499-6564 6499-6564 6499-6564

1. Many contig positions are listed in the Supplemental material of Mishmar, D., Ruiz-Pesini, E., Brandon, M., and Wallace, D.C. 2004. Mitochondrial DNA-like sequences in the nucleus (NUMTs): insights into our African origins and the mechanism of foreign DNA integration. Human Mutation 23(2):125-133.