MITOMAP: mtDNA Coding Region & RNA Sequence Variants
Last Edited: Nov 20, 2024
The GB frequency data is derived from
61124 GenBank sequences with size greater than 15.4kbp and
80432 Control Region sequences with size 0.4-1.6kbp. These sequences have been pre-loaded into Mitomaster and represent almost all haplogroups known to date. We will be updating and refining this set of sequences on a regular basis. As a caveat, please note that GenBank sequences may not be of equal quality
(Yao, et al, 2009), that some of these sequences are from individuals with past, current or future disease, and that this portion of our data set has not been hand-curated by Mitomap.
For more details about the current GenBank sequence set, please see
http://www.mitomap.org/MITOMAP/GBFreqInfo
577,"
MT-TF","G-A","-","-","tRNA","0.000%","0","
1"579,"
MT-TF","T-C","-","-","tRNA","0.000%","0","
1"580,"
MT-TF","T-C","-","-","tRNA","0.000%","0","
1"580,"
MT-TF","T-del","-","-","tRNA","0.000%","0","
1"581,"
MT-TF","A-C","-","-","tRNA","0.000%","0","
1"583,"
MT-TF","G-T","-","-","tRNA","0.000%","0","
1"584,"
MT-TF","T-A","-","-","tRNA","0.000%","0","
1"585,"
MT-TF","A-AA","-","-","tRNA","0.000%","0","
1"585,"
MT-TF","A-G","-","-","tRNA","0.002%","
1","
1"588,"
MT-TF","T-C","-","-","tRNA","0.000%","0","
1"588,"
MT-TF","T-TCACAGTTTATGTAGCT","-","-","tRNA","0.000%","0","
1"589,"
MT-TF","T-del","-","-","tRNA","0.003%","
2","
1"589,"
MT-TF","T-A","-","-","tRNA","0.000%","0","
1"589,"
MT-TF","T-TAGTTTATGTAGCTT","-","-","tRNA","0.000%","0","
1"590,"
MT-TF","A-AA","-","-","tRNA","0.002%","
1","
1"590,"
MT-TF","A-ACACAGTTTATGTAGCTTA","-","-","tRNA","0.000%","0","
1"590,"
MT-TF","A-C","-","-","tRNA","0.000%","0","
1"591,"
MT-TF","C-A","-","-","tRNA","0.010%","
6","
1"591,"
MT-TF","C-CCAGTTTATGTAGCTTAC","-","-","tRNA","0.000%","0","
1"591,"
MT-TF","C-T","-","-","tRNA","0.000%","0","
1"592,"
MT-TF","C-A","-","-","tRNA","0.003%","
2","
1"592,"
MT-TF","C-CC","-","-","tRNA","0.000%","0","
1"592,"
MT-TF","C-T","-","-","tRNA","0.008%","
5","
4"593,"
MT-TF","T-A","-","-","tRNA","0.018%","
11","
2"593,"
MT-TF","T-del","-","-","tRNA","0.005%","
3","
1"593,"
MT-TF","T-C","-","-","tRNA","
0.481% ","
294","
17"593,"
MT-TF","T-G","-","-","tRNA","0.003%","
2","
1"594,"
MT-TF","C-A","-","-","tRNA","0.002%","
1","
1"594,"
MT-TF","C-T","-","-","tRNA","0.008%","
5","
2"595,"
MT-TF","C-A","-","-","tRNA","0.003%","
2","
2"595,"
MT-TF","C-CA","-","-","tRNA","0.002%","
1","
1"595,"
MT-TF","C-CC","-","-","tRNA","
0.260% ","
159","
5"595,"
MT-TF","C-T","-","-","tRNA","0.002%","
1","
2"596,"
MT-TF","T-C","-","-","tRNA","0.029%","
18","
4"597,"
MT-TF","C-CC","-","-","tRNA","0.003%","
2","
1"597,"
MT-TF","C-CT","-","-","tRNA","0.039%","
24","
2"597,"
MT-TF","C-T","-","-","tRNA","0.211%","
129","
5"598,"
MT-TF","A-AT","-","-","tRNA","0.003%","
2","
1"598,"
MT-TF","A-ATCA","-","-","tRNA","0.000%","0","
1"600,"
MT-TF","A-del","-","-","tRNA","0.000%","0","
1"600,"
MT-TF","A-AA","-","-","tRNA","0.002%","
1","
1"601,"
MT-TF","G-A","-","-","tRNA","0.000%","0","
1"603,"
MT-TF","A-G","-","-","tRNA","0.005%","
3","
2"604,"
MT-TF","A-G","-","-","tRNA","0.000%","0","
1"604,"
MT-TF","A-T","-","-","tRNA","0.003%","
2","
1"605,"
MT-TF","T-C","-","-","tRNA","0.000%","0","
1"606,"
MT-TF","A-G","-","-","tRNA","0.036%","
22","
3"606,"
MT-TF","A-T","-","-","tRNA","0.000%","0","
1"608,"
MT-TF","A-T","-","-","tRNA","0.000%","0","
1"608,"
MT-TF","A-G","-","-","tRNA","0.000%","0","
1"610,"
MT-TF","T-C","-","-","tRNA","0.000%","0","
1"612,"
MT-TF","A-G","-","-","tRNA","0.000%","0","
1"614,"
MT-TF","AA-del","-","-","tRNA","0.000%","0","
1"614,"
MT-TF","A-G","-","-","tRNA","0.015%","
9","
1"614,"
MT-TF","A-T","-","-","tRNA","0.002%","
1","
1"616,"
MT-TF","T-A","-","-","tRNA","0.000%","0","
1"616,"
MT-TF","T-G","-","-","tRNA","0.002%","
1","
1"619,"
MT-TF","T-A","-","-","tRNA","0.000%","0","
1"619,"
MT-TF","T-C","-","-","tRNA","0.005%","
3","
1"620,"
MT-TF","T-C","-","-","tRNA","0.000%","0","
1"620,"
MT-TF","T-TT","-","-","tRNA","0.000%","0","
1"621,"
MT-TF","A-G","-","-","tRNA","0.002%","
1","
2"622,"
MT-TF","G-A","-","-","tRNA","0.000%","0","
1"622,"
MT-TF","G-C","-","-","tRNA","0.002%","
1","
1"624,"
MT-TF","C-T","-","-","tRNA","0.000%","0","
1"625,"
MT-TF","G-T","-","-","tRNA","0.000%","0","
1"627,"
MT-TF","G-del","-","-","tRNA","0.000%","0","
1"627,"
MT-TF","G-A","-","-","tRNA","0.000%","0","
1"628,"
MT-TF","C-A","-","-","tRNA","0.000%","0","
1"628,"
MT-TF","C-T","-","-","tRNA","0.005%","
3","
1"629,"
MT-TF","T-A","-","-","tRNA","0.000%","0","
2"629,"
MT-TF","T-C","-","-","tRNA","
0.260% ","
159","
8"629,"
MT-TF","T-G","-","-","tRNA","0.000%","0","
1"630,"
MT-TF","C-T","-","-","tRNA","0.020%","
12","
2"631,"
MT-TF","A-AA","-","-","tRNA","0.000%","0","
1"631,"
MT-TF","A-G","-","-","tRNA","0.003%","
2","
1"632,"
MT-TF","CA-del","-","-","tRNA","0.000%","0","
1"632,"
MT-TF","C-T","-","-","tRNA","0.010%","
6","
1"633,"
MT-TF","A-G","-","-","tRNA","0.021%","
13","
4"633,"
MT-TF","A-T","-","-","tRNA","0.003%","
2","
1"634,"
MT-TF","T-A","-","-","tRNA","0.015%","
9","
3"634,"
MT-TF","T-C","-","-","tRNA","0.052%","
32","
4"634,"
MT-TF","T-G","-","-","tRNA","0.002%","
1","
1"635,"
MT-TF","C-T","-","-","tRNA","0.010%","
6","
3"636,"
MT-TF","A-C","-","-","tRNA","0.002%","
1","
1"636,"
MT-TF","A-G","-","-","tRNA","0.033%","
20","
1"636,"
MT-TF","A-T","-","-","tRNA","0.002%","
1","
1"643,"
MT-TF","A-G","-","-","tRNA","0.000%","0","
1"643,"
MT-TF","A-T","-","-","tRNA","0.002%","
1","
1"644,"
MT-TF","A-G","-","-","tRNA","0.046%","
28","
2"645,"
MT-TF","A-AA","-","-","tRNA","0.002%","
1","
1"645,"
MT-TF","A-G","-","-","tRNA","0.000%","0","
1"645,"
MT-HSP2","A-AA","-","-","tRNA","0.002%","
1","
1"645,"
MT-HSP2","A-G","-","-","tRNA","0.000%","0","
1"647,"
MT-TF","A-G","-","-","tRNA","0.018%","
11","
3"648,"
MT-RNR1","A-G","-","-","rRNA","0.008%","
5","
1"649,"
MT-RNR1","A-AA","-","-","rRNA","0.002%","
1","
1"649,"
MT-RNR1","A-G","-","-","rRNA","0.000%","0","
1"650,"
MT-RNR1","T-G","-","-","rRNA","0.000%","0","
1"650,"
MT-RNR1","T-C","-","-","rRNA","0.072%","
44","
2"652,"
MT-RNR1","G-A","-","-","rRNA","0.000%","0","
1"652,"
MT-RNR1","G-T","-","-","rRNA","0.002%","
1","
1"653,"
MT-RNR1","G-T","-","-","rRNA","0.002%","
1","
1"653,"
MT-RNR1","G-A","-","-","rRNA","0.000%","0","
1"654,"
MT-RNR1","T-C","-","-","rRNA","0.031%","
19","
3"655,"
MT-RNR1","T-G","-","-","rRNA","0.000%","0","
1"656,"
MT-RNR1","T-TT","-","-","rRNA","0.002%","
1","
1"656,"
MT-RNR1","T-G","-","-","rRNA","0.002%","
1","
1"656,"
MT-RNR1","T-C","-","-","rRNA","0.108%","
66","
2"657,"
MT-RNR1","G-A","-","-","rRNA","0.000%","0","
1"658,"
MT-RNR1","G-T","-","-","rRNA","0.002%","
1","
1"658,"
MT-RNR1","G-A","-","-","rRNA","0.000%","0","
1"659,"
MT-RNR1","T-C","-","-","rRNA","0.000%","0","
1"662,"
MT-RNR1","T-C","-","-","rRNA","0.000%","0","
1"663,"
MT-RNR1","A-G","-","-","rRNA","
2.888% ","
1765","
47"664,"
MT-RNR1","G-GT","-","-","rRNA","0.000%","0","
1"664,"
MT-RNR1","G-A","-","-","rRNA","0.000%","0","
1"668,"
MT-RNR1","T-C","-","-","rRNA","0.000%","0","
1"669,"
MT-RNR1","T-C","-","-","rRNA","0.187%","
114","
8"670,"
MT-RNR1","C-T","-","-","rRNA","0.000%","0","
1"671,"
MT-RNR1","T-C","-","-","rRNA","0.000%","0","
1"673,"
MT-RNR1","T-C","-","-","rRNA","0.000%","0","
1"674,"
MT-RNR1","T-A","-","-","rRNA","0.000%","0","
1"675,"
MT-RNR1","A-G","-","-","rRNA","0.007%","
4","
1"675,"
MT-RNR1","A-T","-","-","rRNA","0.000%","0","
1"676,"
MT-RNR1","G-T","-","-","rRNA","0.002%","
1","
1"676,"
MT-RNR1","G-A","-","-","rRNA","0.039%","
24","
2"678,"
MT-RNR1","T-C","-","-","rRNA","0.029%","
18","
1"679,"
MT-RNR1","C-T","-","-","rRNA","0.013%","
8","
1"679,"
MT-RNR1","C-A","-","-","rRNA","0.003%","
2","
1"680,"
MT-RNR1","T-C","-","-","rRNA","
0.254% ","
155","
7"681,"
MT-RNR1","T-C","-","-","rRNA","
0.272% ","
166","
9"681,"
MT-RNR1","T-A","-","-","rRNA","0.000%","0","
1"681,"
MT-RNR1","T-del","-","-","rRNA","0.000%","0","
1"682,"
MT-RNR1","A-T","-","-","rRNA","0.003%","
2","
1"683,"
MT-RNR1","G-T","-","-","rRNA","0.003%","
2","
1"683,"
MT-RNR1","G-A","-","-","rRNA","0.002%","
1","
1"684,"
MT-RNR1","T-C","-","-","rRNA","0.000%","0","
1"686,"
MT-RNR1","A-G","-","-","rRNA","0.011%","
7","
1"688,"
MT-RNR1","A-del","-","-","rRNA","0.002%","
1","
1"689,"
MT-RNR1","T-G","-","-","rRNA","0.000%","0","
2"689,"
MT-RNR1","T-C","-","-","rRNA","0.010%","
6","
2"689,"
MT-RNR1","T-A","-","-","rRNA","0.000%","0","
1"690,"
MT-RNR1","T-C","-","-","rRNA","0.000%","0","
1"692,"
MT-RNR1","C-T","-","-","rRNA","0.000%","0","
1"695,"
MT-RNR1","A-G","-","-","rRNA","0.002%","
1","
1"699,"
MT-RNR1","A-G","-","-","rRNA","0.003%","
2","
1"700,"
MT-RNR1","A-G","-","-","rRNA","0.002%","
1","
1"702,"
MT-RNR1","C-T","-","-","rRNA","0.016%","
10","
1"703,"
MT-RNR1","A-C","-","-","rRNA","0.002%","
1","
1"704,"
MT-RNR1","T-C","-","-","rRNA","0.000%","0","
1"704,"
MT-RNR1","T-G","-","-","rRNA","0.002%","
1","
1"705,"
MT-RNR1","C-T","-","-","rRNA","0.005%","
3","
1"706,"
MT-RNR1","C-A","-","-","rRNA","0.000%","0","
1"706,"
MT-RNR1","C-T","-","-","rRNA","0.000%","0","
1"707,"
MT-RNR1","C-T","-","-","rRNA","0.000%","0","
1"708,"
MT-RNR1","C-T","-","-","rRNA","0.000%","0","
1"708,"
MT-RNR1","C-G","-","-","rRNA","0.000%","0","
1"708,"
MT-RNR1","C-A","-","-","rRNA","0.002%","
1","
1"709,"
MT-RNR1","G-C","-","-","rRNA","0.002%","
1","
1"709,"
MT-RNR1","G-A","-","-","rRNA","
13.119% ","
8019","
111"710,"
MT-RNR1","T-A","-","-","rRNA","0.002%","
1","
1"710,"
MT-RNR1","T-C","-","-","rRNA","
0.681% ","
416","
11"711,"
MT-RNR1","T-G","-","-","rRNA","0.000%","0","
1"711,"
MT-RNR1","T-TT","-","-","rRNA","0.000%","0","
1"711,"
MT-RNR1","T-C","-","-","rRNA","0.301%","
184","
6"711,"
MT-RNR1","T-del","-","-","rRNA","0.000%","0","
1"712,"
MT-RNR1","C-A","-","-","rRNA","0.011%","
7","
1"712,"
MT-RNR1","C-T","-","-","rRNA","0.003%","
2","
1"714,"
MT-RNR1","A-G","-","-","rRNA","0.020%","
12","
1"714,"
MT-RNR1","A-T","-","-","rRNA","0.000%","0","
2"715,"
MT-RNR1","G-A","-","-","rRNA","0.002%","
1","
1"717,"
MT-RNR1","G-A","-","-","rRNA","0.000%","0","
1"718,"
MT-RNR1","A-T","-","-","rRNA","0.000%","0","
1"718,"
MT-RNR1","A-G","-","-","rRNA","0.000%","0","
1"719,"
MT-RNR1","G-A","-","-","rRNA","
0.901% ","
551","
3"720,"
MT-RNR1","T-C","-","-","rRNA","0.011%","
7","
1"721,"
MT-RNR1","T-A","-","-","rRNA","0.000%","0","
1"721,"
MT-RNR1","T-C","-","-","rRNA","0.227%","
139","
9"722,"
MT-RNR1","C-A","-","-","rRNA","0.002%","
1","
1"722,"
MT-RNR1","C-T","-","-","rRNA","0.151%","
92","
10"723,"
MT-RNR1","A-T","-","-","rRNA","0.015%","
9","
3"723,"
MT-RNR1","A-C","-","-","rRNA","0.082%","
50","
7"723,"
MT-RNR1","A-G","-","-","rRNA","
0.276% ","
169","
5"724,"
MT-RNR1","C-G","-","-","rRNA","0.003%","
2","
1"725,"
MT-RNR1","C-T","-","-","rRNA","0.005%","
3","
1"726,"
MT-RNR1","C-A","-","-","rRNA","0.002%","
1","
1"726,"
MT-RNR1","C-CC","-","-","rRNA","0.000%","0","
1"727,"
MT-RNR1","T-C","-","-","rRNA","0.003%","
2","
1"728,"
MT-RNR1","C-T","-","-","rRNA","0.002%","
1","
1"728,"
MT-RNR1","C-G","-","-","rRNA","0.003%","
2","
1"729,"
MT-RNR1","T-C","-","-","rRNA","0.020%","
12","
1"730,"
MT-RNR1","A-G","-","-","rRNA","0.000%","0","
1"731,"
MT-RNR1","A-G","-","-","rRNA","0.057%","
35","
1"732,"
MT-RNR1","A-del","-","-","rRNA","0.002%","
1","
1"732,"
MT-RNR1","A-G","-","-","rRNA","0.051%","
31","
1"733,"
MT-RNR1","T-C","-","-","rRNA","0.000%","0","
1"734,"
MT-RNR1","C-T","-","-","rRNA","0.000%","0","
1"734,"
MT-RNR1","C-G","-","-","rRNA","0.003%","
2","
1"735,"
MT-RNR1","A-AG","-","-","rRNA","0.002%","
1","
1"735,"
MT-RNR1","A-C","-","-","rRNA","0.000%","0","
1"735,"
MT-RNR1","A-G","-","-","rRNA","0.126%","
77","
2"736,"
MT-RNR1","C-T","-","-","rRNA","0.018%","
11","
3"736,"
MT-RNR1","C-G","-","-","rRNA","0.003%","
2","
1"736,"
MT-RNR1","C-A","-","-","rRNA","0.000%","0","
1"737,"
MT-RNR1","C-T","-","-","rRNA","0.005%","
3","
2"738,"
MT-RNR1","A-G","-","-","rRNA","0.008%","
5","
1"738,"
MT-RNR1","A-C","-","-","rRNA","0.000%","0","
1"739,"
MT-RNR1","C-T","-","-","rRNA","0.159%","
97","
3"740,"
MT-RNR1","G-A","-","-","rRNA","0.054%","
33","
5"741,"
MT-RNR1","A-G","-","-","rRNA","0.000%","0","
1"742,"
MT-RNR1","T-G","-","-","rRNA","0.000%","0","
1"742,"
MT-RNR1","T-C","-","-","rRNA","0.031%","
19","
3"742,"
MT-RNR1","T-A","-","-","rRNA","0.003%","
2","
1"743,"
MT-RNR1","C-T","-","-","rRNA","0.002%","
1","
1"744,"
MT-RNR1","A-G","-","-","rRNA","0.002%","
1","
1"744,"
MT-RNR1","A-C","-","-","rRNA","0.000%","0","
1"745,"
MT-RNR1","A-G","-","-","rRNA","0.062%","
38","
7"745,"
MT-RNR1","A-AG","-","-","rRNA","0.000%","0","
1"745,"
MT-RNR1","A-AT","-","-","rRNA","0.062%","
38","
1"746,"
MT-RNR1","A-G","-","-","rRNA","0.005%","
3","
1"747,"
MT-RNR1","A-AA","-","-","rRNA","0.002%","
1","
1"748,"
MT-RNR1","G-A","-","-","rRNA","0.013%","
8","
2"749,"
MT-RNR1","G-A","-","-","rRNA","0.013%","
8","
1"750,"
MT-RNR1","A-C","-","-","rRNA","0.002%","
1","
1"750,"
MT-RNR1","A-G","-","-","rRNA","
98.341% ","
60110","
113"751,"
MT-RNR1","A-T","-","-","rRNA","0.010%","
6","
2"751,"
MT-RNR1","A-C","-","-","rRNA","0.000%","0","
1"751,"
MT-RNR1","A-G","-","-","rRNA","0.049%","
30","
4"752,"
MT-RNR1","C-T","-","-","rRNA","
0.371% ","
227","
17"752,"
MT-RNR1","C-G","-","-","rRNA","0.003%","
2","
1"752,"
MT-RNR1","C-A","-","-","rRNA","0.005%","
3","
1"753,"
MT-RNR1","A-C","-","-","rRNA","0.000%","0","
1"753,"
MT-RNR1","A-T","-","-","rRNA","0.000%","0","
1"755,"
MT-RNR1","G-A","-","-","rRNA","0.003%","
2","
1"756,"
MT-RNR1","C-T","-","-","rRNA","0.007%","
4","
1"759,"
MT-RNR1","C-T","-","-","rRNA","0.010%","
6","
1"759,"
MT-RNR1","C-A","-","-","rRNA","0.000%","0","
1"760,"
MT-RNR1","A-AC","-","-","rRNA","0.002%","
1","
1"761,"
MT-RNR1","A-G","-","-","rRNA","0.008%","
5","
3"762,"
MT-RNR1","G-A","-","-","rRNA","0.000%","0","
1"764,"
MT-RNR1","A-G","-","-","rRNA","0.011%","
7","
1"765,"
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