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The Amino Acids of mtND6 (14149-14673)

Reminder: mtND6 is transcribed off of the reverse strand, beginning at 14673.

 
     *   N   G   R   A   I   E   I   V   I   Y   V   G   V   F   L   T   W 
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
3'  GGA TAA GGG GGC TCG TTA GAG TTA ATG TTA TAT ATG TGG TTG TTT GTT ACA AGT
          14157       14166       14175       14184       14193       14202
5'  CCT ATT CCC CCG AGC AAT CTC AAT TAC AAT ATA TAC ACC AAC AAA CAA TGT TCA


     G   T   V   V   V   L   W   R   G   Y   D   Y   L   A   G   A   G   I 
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
    TGG TCA TTG ATG ATG ATT AGT TGC GGG TAT TAG TAT GTT TCG GGG GCG TGG TTA
          14211       14220       14229       14238       14247       14256
    ACC AGT AAC TAC TAC TAA TCA ACG CCC ATA ATC ATA CAA AGC CCC CGC ACC AAT


     P   D   E   R   I   L   G   S   G   E   G   E   Y   I   M   W   S   G 
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
    TCC TAG GAG GGC TTA GTT GGG ACT GGG GAG AGG AAG TAT TTA ATA AGT CGA AGG
          14265       14274       14283       14292       14301       14310
    AGG ATC CTC CCG AAT CAA CCC TGA CCC CTC TCC TTC ATA AAT TAT TCA GCT TCC


     V   S   N   F   N   V   V   V   V   V   G   D   Y   E   K   V   W   L 
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
    ATG TGA TAA TTT CAA ATG GTG TTG GTG GTG GGG TAG TAT GAG AAA GTG GGT GTC
          14319       14328       14337       14346       14355       14364
    TAC ACT ATT AAA GTT TAC CAC AAC CAC CAC CCC ATC ATA CTC TTT CAC CCA CAG


     V   L   G   V   E   M   A   L   G   V   L   V   S   V   L   V   E   V 
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
    GTG GTT AGG ATG GAG GTA GCG ATT GGG GTG ATT TTG TGA GTG GTT CTG GAG TTG
          14373       14382       14391       14400       14409       14418
    CAC CAA TCC TAC CTC CAT CGC TAA CCC CAC TAA AAC ACT CAC CAA GAC CTC AAC


     G   S   G   W   A   E   P   Y   E   E   I   A   M   A   T   T   Y   G 
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
    GGG ACT GGG GGT ACG GAG TCC TAT GAG GAG TTA TCG GTA GCG ACA TCA TAT AGG
          14427       14436       14445       14454       14463       14472
    CCC TGA CCC CCA TGC CTC AGG ATA CTC CTC AAT AGC CAT CGC TGT AGT ATA TCC


     F   V   V   M   M   G   G   L   Y   I   L   F   V   M   L   G   M   Y 
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
    TTT CTG TTG GTA GTA AGG GGG ATT TAT TTA ATT TTT TTG ATA ATT TGG GTA TAT
          14481       14490       14499       14508       14517       14526
    AAA GAC AAC CAT CAT TCC CCC TAA ATA AAT TAA AAA AAC TAT TAA ACC CAT ATA


     G   G   G   F   N   L   I   I   V   C   G   V   V   G   S   V   I   L 
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
    TGG AGG GGG TTT TAA GTC TTA TTA TTG TGT GGG CTG GTG TGG CGA TTG TTA GTT
          14535       14544       14553       14562       14571       14580
    ACC TCC CCC AAA ATT CAG AAT AAT AAC ACA CCC GAC CAC ACC GCT AAC AAT CAA


     V   L   G   G   Y   I   P   S   P   K   S   S   F   G   V   F   G   M 
    --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- --- ---
    ATG ATT TGG GGG TAT TTA TCC TCT TCC GAA TCT TCT TTT GGG GTG TTT GGG GTA
          14589       14598       14607       14616       14625       14634
    TAC TAA ACC CCC ATA AAT AGG AGA AGG CTT AGA AGA AAA CCC CAC AAA CCC CAT


     V   L   G   V   S   L   L   F   L   A   Y   M   M 
    --- --- --- --- --- --- --- --- --- --- --- --- ---
    ATG ATT TGG GTG TGA GTT GTC TTT GTT TCG TAT GTA GTA 5'
          14643       14652       14661       14670
    TAC TAA ACC CAC ACT CAA CAG AAA CAA AGC ATA CAT CAT 3'

* Terminates at UAG with frameshift (Temperley 2010)

Nucleotides 14199T, 14272C, 14365C, and 14368C represent corrected Cambridge sequence errors per Andrews etal (1999).

Amino Acid Distribution in human mtND6

ND6 (14149-14673) AA

#

%

Ala (A)

8

4.6%

Arg (R)

3

1.7%

Asn (N)

4

2.3%

Asp (D)

3

1.7%

Cys (C)

1

0.6%

Gln (Q)

0

0.0%

Glu (E)

10

5.7%

Gly (G)

29

16.6%

His (H)

0

0.0%

Ile (I)

12

6.9%

End (*)

1

0.6%

Leu1 (L)(UUA/G)

14

8.0%

Leu2 (L)(CUN)

3

1.7%

Lys (K)

2

1.1%

Met (M)

10

5.7%

phe (F)

10

5.7%

pro (p)

5

2.9%

Ser1 (S)(UCN)

5

2.9%

Ser2 (S)(AGU/C)

5

2.9%

Thr (T)

3

1.7%

Trp (W)

5

2.9%

Tyr (Y)

11

6.3%

Val (V)

31

17.7%

ND6 Total AA

175

100.0%

Acidic (Asp + Glu)

13

7.4%

basic (Arg + Lys)

5

2.9%

Aromatic (phe + Trp + Tyr)

26

14.9%

Hydrophobic (Aromatic + Ile + Leu + Met + Val)

96

54.9%

Molecular Wt

18688

Average pI

5.86



Amino acid detail: ATP6, ATP8, ND1, ND2, ND3, ND4, ND4L, ND5, ND6, CO1, CO2, CO3, CytB.

Go to the Human Mitochondrial Genetic Code.
Topic revision: r1 - 15 Sep 2015, UnknownUser
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