You are here: Foswiki>MITOMAP Web>WebIndex (15 Sep 2015, UnknownUser)Edit Attach

Detailed topic list for MITOMAP Web

Results from ConfirmedMutations web retrieved at 23:51 (GMT)

Number of topics: 1

Results from CitingMitomap web retrieved at 23:51 (GMT)

Number of topics: 1

Results from MITOMAP web retrieved at 23:51 (GMT)

AllVariants
All Current Variants A summary of counts and frequencies generated dynamically from Mitomap's current sequence set Execute Search: : View all variants in Mitom...
BA1BS1Summary
ClinGenApproved Summary of Variants Meeting ClinGen Approved Frequency Criteria for BA1 and BS1 .data th, .data td { border: 1px solid #CCC; padding: 5px; }...
Benign
ClinGenApproved Variants Meeting ClinGen Approved Frequency Criteria for BA1 and BS1 BA1 ( = 1%), total: 457 (Benign: 457); BS1 (0.5 Report date: 2024 10 31 F...
BenignTBD
ClinGenApproved Variants Meeting Frequency Criteria for BA1 and BS1 but Queued for Deeper Curation(currently not classified or classified as VUS) BA1 frequency ( ...
CambridgeReanalysis
Reanalysis of the Cambridge reference sequence by resequencing the original placental mtDNA sample Table from Andrews etal (1999), with permission of the authors....
CitingMitomap
MITOMAP A human mitochondrial genome database Please use one of the following two formats to cite MITOMAP * MITOMAP: A Human Mitochondrial Genome Database. htt...
ClinGenApproved
ClinGenApproved Variants Meeting ClinGen Approved Frequency Criteria for BA1 and BS1 BA1 ( = 1%), total: 457 (Benign: 457); BS1 (0.5 Report date: 2024 10 31 F...
ClinGenApproved-2021-01-15
ClinGenApproved Variants meeting ClinGen approved frequency criteria for BA1 and BS1 BA1 ( = 1%), total: 555 (Benign: 555); BS1 (0.5 Report date: 2021 07 09 l...
ClinGenApproved-V1
ClinGenApproved Variants meeting ClinGen approved frequency criteria for BA1 and BS1 BA1 ( = 1%), total: 528 (Benign: 528); BS1 (0.5 Report date: 2021 05 19 l...
ClinGenApproved1
ClinGenApproved Variants meeting ClinGen approved frequency criteria for BA1 and BS1 BA1 ( = 1%), total: 530 (benign: 530); BS1 (0.5 Report date: 2021 05 18 l...
ClinGenApproved2
ClinGenApproved Variants Meeting ClinGen Approved Frequency Criteria for BA1 and BS1 BA1 ( = 1%), total: 552 (Benign: 552); BS1 (0.5 Report date: 2022 11 03 l...
ClinGenApprovedOld
ClinGenApproved Variants meeting ClinGen approved frequency criteria for BA1 and BS1 BA1: = 1%, total: 414; BS1: 0.05 Report date: 2020 07 02 loading data......
ClinicalPhenotypes1
Clinical Phenotypes (non LHON) Associated with mtDNA Polypeptide Gene Mutations Reported in the Literature Syndromes Locus Disease* Allele ...
ClinicalPhenotypesPolypeptide
Reported Mitochondrial DNA Polypeptide Gene Disease Mutations, Non LHON Last update: March 2012 Panel A: The Top Pathogenic mtDNA Polypeptide Missense Mutations, ...
ClinicalPhenotypesRNA
Clinical Phenotypes Associated with mtDNA rRNA tRNA Mutations, Non LHON Last update: March 2012 The Top mtDNA Protein Synthesis (rRNA tRNA) Gene Mutations Sy...
ComplexRearrangements
MITOMAP: mtDNA Complex Rearrangements Last Edited: Nov 21, 2003 th { text align: center; } #gb footer { font size: 12px; } .mark { color: red; } #gb foot...
ComplexRearrangementsIE
MITOMAP: mtDNA Complex Rearrangements Last Edited: Nov 21, 2003 Parental Molecule Insert Size (bp) Apparent mtDNA Species Insert (nt) Flanking Repeats ...
ComplexRearrangementsTemplate
MITOMAP: mtDNA Complex Rearrangements Last Edited: MM:EditDate:MM Parental Molecule Insert Size (bp) Apparent mtDNA Species Insert (nt) Flanking Repeats...
ConfirmedCriteria
Criteria for Assessment of Variant Pathogenicity For Mitomap to assign a status of "Cfrm" to a possibly pathogenic variant, we look for confirming reports which a...
ConfirmedMutations
Report date: 2024 10 31 Mitomap's Confirmed Pathogenic Mutations td { padding left: 5px; padding right: 5px; } For more details, including current freque...
ConfirmedMutationsArchived
Mitomap's Confirmed Pathogenic Mutations For more details, including current frequencies and available sequences, see * Coding and Control Region Cfrm Mutation...
ConfirmedMutationsBak
Mitomap's Confirmed Pathogenic Mutations For more details, including current frequencies and available sequences, see * Coding and Control Region Cfrm Mutation...
ContinentVariants
MITOMAP: Common Continent Specific mtDNA Variants Last Edited: Jun 01, 2003 th { text align: center; } #gb footer { font size: 12px; } .mark { color: red...
ContinentVariantsIE
MITOMAP: Common Continent Specific mtDNA Variants Last Edited: Jun 01, 2003 Haplogroup Continent mtDNA Variants Continental mtDNA "AFRICA","L","3592 Hp...
ContinentVariantsTemplate
MITOMAP: Common Continent Specific mtDNA Variants Last Edited: MM:EditDate:MM Haplogroup Continent mtDNA Variants Continental mtDNA MM:TableData:MM Note...
DeletionsMultiple
MITOMAP: Reported Multiple mtDNA Deletions Within Individuals Last Edited: May 25, 2012 th { text align: center; } #gb footer { font size: 12px; } .mark { ...
DeletionsMultipleIE
MITOMAP: Reported Multiple mtDNA Deletions Within Individuals Last Edited: May 25, 2012 Deletion Junction (nt:nt) Deletion Size(bp) Repeat Type Repeat Loc...
DeletionsMultipleTemplate
MITOMAP: Reported Multiple mtDNA Deletions Within Individuals Last Edited: MM:EditDate:MM Deletion Junction (nt:nt) Deletion Size(bp) Repeat Type Repeat L...
DeletionsSingle
MITOMAP: Reported mtDNA Deletions Last Edited: Mar 21, 2024 th { text align: center; } #gb footer { font size: 12px; } .mark { color: red; } #gb footer ....
DeletionsSingleIE
MITOMAP: Reported mtDNA Deletions Last Edited: Mar 21, 2024 Deletion Junction (nt:nt) Deletion Size (bp) Repeat Location (nt) Repeat Type More Info "1...
DeletionsSingleTemplate
MITOMAP: Reported mtDNA Deletions Last Edited: MM:EditDate:MM Deletion Junction (nt:nt) Deletion Size (bp) Repeat Location (nt) Repeat Type More Info ...
DiseaseList
MITOMAP Disease Listing / Allele Classification with links to OMIM AD: Alzheimer's Disease ADPD: Alzheimer's Disease and Parkinsons's Disease AMDF: Ataxia, M...
GBFreqInfo
GenBank Frequency Information The current GenBank frequency data in our variant tables is derived from 61,134 human mitochondrial DNA sequences with size greater ...
GBFreqInfo-2019-05-01
GenBank Frequency Information The current GenBank frequency data in our variant tables is derived from 48,882 human mitochondrial DNA sequences with size greater ...
GBFreqInfo-2021-01-15
GenBank Frequency Information The current GenBank frequency data in our variant tables is derived from 51,836 human mitochondrial DNA sequences with size greater ...
GBFreqInfo-2022-01-15
GenBank Frequency Information The current GenBank frequency data in our variant tables is derived from 54,594 human mitochondrial DNA sequences with size greater ...
GenbankInfo
2021 Update #1: On Jan 15, 2021 we added 164 new full length (FL) and 206 new control region (CR) GenBank sequences to our database. This brings our total number ...
GenbankUpdate
2024 GenBank Sequence Update #1: On January 16, 2024 we added 566 new full length (FL) and 830 new control region (CR) GenBank sequences to our database. However,...
GenomeLoci
MITOMAP: Mitochondrial DNA Function Locations Last Edited: Jun 18, 2024 th { text align: center; } #gb footer { font size: 12px; } .mark { color: red; } ...
GenomeLociIE
MITOMAP: Mitochondrial DNA Function Locations Last Edited: Jun 18, 2024 Map Locus Starting Ending Shorthand Description Reference "MT OHR57",57,57,"...
GenomeLociTemplate
MITOMAP: Mitochondrial DNA Function Locations Last Edited: MM:EditDate:MM Map Locus Starting Ending Shorthand Description Reference MM:TableData:MM ...
HaplogrepLink
PhyloTree Markers
HaplogrepNote
MITOMAP uses HaploGrep3 with Phylotree 17.2 (rCRS) for haplogroup determination.
HaplogroupFreqs
Estimated Worldwide Haplotype Frequencies (%) Compiled by O. Derbeneva 2009 Please note: These numbers are simple means for published frequencies, not always have...
HaplogroupInfo
Haplogroup Information
HaplogroupMarkers
To search this page for a position of interest, use your browser's search function, Ctrl F (Windows) or ? Command F (Mac). Report date: 2023 06 15 Top Level ...
HaplogroupMarkers2009
Estimated Worldwide Haplotype Frequencies (%) Compiled for Mitomap by O. Derbeneva 2009 Please note: These numbers are for illustrative purposes, not for solid c...
HaplogroupMarkersLtrNumLtr
Download data Markers Found at 80% in Haplogroups (Ltr Num Ltr Level) Data retrieved from sequences collected from Genbank on 2024 1 26Number of unique vari...
Number of topics: 48
Page 1 of 5 Next >

See also the faster WebTopicList
Topic revision: r1 - 15 Sep 2015, UnknownUser

POLG Server
MitoScape

This site is powered by FoswikiCopyright © by the contributing authors. All material on this collaboration platform is the property of the contributing authors.
Ideas, requests, problems regarding Foswiki? Send feedback